Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g0391 ATGATGCAAAGCATGAAAATGGTCTTCATGACCCTCACCCTGGTGGTGTTGACACTCAACACAAAAAGAGCAGAAGGTGCTCGTGCTTTCTTTGTGTTCGGTGACTCACTCGTTGACAGTGGCAACAACAATTACTTGCCAACCACGGCACGTGCCGACTCTCCCCCTTACGGCATCGACTATCCCACCCATCGCCCCACCGGTCGCTTTTCCAATGGCTTTAACCTCCCTGACCTTATTAGCCAGCATATTGGGTCTGAACCAACGTTGCCATACTTGAGCCCTGAGCTGACGGGACAAAAGCTCTTGGTTGGGGCGAATTTCGCTTCGGCAGGGATAGGAATCCTTAATGACACGGGCATCCAATTTGTGGCGATCTTAAGAATGTTCCAGCAGTTTGCGTTGTTCGAGCAGTACCAACAACGGTTGAGTGCACAAGTAGGTGCAGCGCAAGCAAAGCGAATAGTGAATGGGGCATTGGTGTTGATGACGCTTGGTGGCAACGACTTCGTTAACAACTATTTTGTGACTCCTGTAACAGTCAGGTCTCGCCAATTCACTGTACCTCAGTTTTCTCGTTACCTTATCTCTGAGTATCAAAAAATTCTCATGAGGTTATATGAGTTGGGAGCAAGAAGGGTGCTTGTGACAGGAACTGGCCCAATGGGTTGTGTTCCTTCTCAACTTGCTACAAGGAGTAGAAATGGAGAGTGTGTGCCTCAGTTGCAACAGGCTGCACAAATTTTCAACCCACTTCTGGTCCAAATGACTAGAGAAATCAACTCCCAAGTGGGTTCAGACGTTTTTGTTGCTGTCAATGCCTTCCAAATGAACATGAATTTCATCACCAACCCCGAAAGATTTGGTTTTGTTACATCAAAGGTTGCATGTTGCGGTCAAGGTCGTTTCAATGGGTTGGGACTATGCACAACTTTGTCAAATCTATGCCCAAACCGTAATATCTATGCGTTTTGGGACGCTTATCACCCAACTGAACGTGCTTTGGGATTCATCGTTCGGGACATTTTTAGTGGAACTTCTGATTATATGACTCCTATGAACCTCAGCACCATCATGGCCATTGATTCCAACCTTTATTAA 1101 0.465 MMQSMKMVFMTLTLVVLTLNTKRAEGARAFFVFGDSLVDSGNNNYLPTTARADSPPYGIDYPTHRPTGRFSNGFNLPDLISQHIGSEPTLPYLSPELTGQKLLVGANFASAGIGILNDTGIQFVAILRMFQQFALFEQYQQRLSAQVGAAQAKRIVNGALVLMTLGGNDFVNNYFVTPVTVRSRQFTVPQFSRYLISEYQKILMRLYELGARRVLVTGTGPMGCVPSQLATRSRNGECVPQLQQAAQIFNPLLVQMTREINSQVGSDVFVAVNAFQMNMNFITNPERFGFVTSKVACCGQGRFNGLGLCTTLSNLCPNRNIYAFWDAYHPTERALGFIVRDIFSGTSDYMTPMNLSTIMAIDSNLY* 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g0391 366 CDD SGNH_plant_lipase_like 29 345 IPR035669 -
Apr8g0391 366 PANTHER GDSL LIPASE/ACYLHYDROLASE FAMILY PROTEIN (AFU_ORTHOLOGUE AFUA_4G14700) 5 362 - -
Apr8g0391 366 Gene3D SGNH hydrolase 18 348 IPR036514 -
Apr8g0391 366 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 5 362 - -
Apr8g0391 366 Pfam GDSL-like Lipase/Acylhydrolase 31 334 IPR001087 GO:0016788
Apr8g0391 366 SUPERFAMILY SGNH hydrolase 30 342 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g0391 Apr-Chr8 3319471 3321745 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g0391 29 359 Acyl Lipid Metabolism Gene Families AT4G10950 31.231 1.46e-57 191
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g0391 - - gmx:100800835 649.047
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g0096 4 860608 867322 Apr8g0391 8 3319471 3321745 PCT