Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g0096 ATGGCCTTCTCTATCCAGAACTTGGATCCGACAGTTGCGATGCACCATCTCACAACAGCCCTTAGGCCAGGGCCATTTGTCAACAGTATCTGCAATCAAGTACATGCAAATGGAAGAACTGGCCGAGTTCCACAACCAGGGCATGATAGTGGTAACATAATTAAGCTAATGTCAAGTACTATGAGAGTGGTCCTAGTCATGGCCACCATGGTGGTGGCAGTGATTGTGGTTGATCCAAAGAGAACAGAGGGAACTCGTGCTTTCTTTGTGTTTGGAGACTCACTGGTTGACAGTGGCAACAACAATTACTTGCCAACCCCGGCACGTGCTGACTCTCCCCCTTATGGTATTGACTATCCCACTCATCGCCCCACTGGACGCTTCTCCAATGGCCTCAACCTCCCTGATCTTATCAGCAAGCGAATTGGGTCTGAGCCCACATTGCCCTACTTGAGCCCTGAATTAAATGGACAAAAGCTTTTGGTTGGGGCCAATTTTGCTTCTGCTGGGACGGGAATCCTCAATGACACTGGCATCCAATTTGTTGGTATTTTGAGAATGTTCCAGCAGTTTGCATTGTTCGTGGAGTACCAACAACGGTTAAGTGAAGTTGTAGGAAGTGAAAGAGCCAAAAGGGTTGTAAATGGGGCATTGGTTCTTATGACATTGGGTGGTAATGACTTTGTTAACAATTATTTCTTCACTCCAATCACTCCAAGGTCTCACCAATTCAGCGTGCCCCAGTTCTCTACCTACCTTATCTATGAGTACCGAAAAATTCTCATGAGATTGTATGAGTTGGGAGCTCGAAGGGTTCTGGTGACAGGAACCGGTCCACTTGGATGTATCCCATCTCAACTTGCTCAGAGGAGCAGCAATGGTGAGTGTGTCCCAGAGTTACAACAAGCTACTCAGATTTTCAACCCTATGCTTCTCCAAATGACTACAAATCTCAACTCCCAGCTTGGTTCCGACATTTTTGTTGCTGTCAATGCCTTCCTAATGAACATTAATTTCATCTCCAACCCTCAAGAATATGGTTTTGTGACATCAAAGGTAGCATGTTGTGGGCAAGGTCGATTTAACGGGGTAGGACTGTGCAACCCTTTATCCAGCGTGTGCCCAAACAGGGATCTCTATGCATTTTGGGATGCTTTCCACCCAAGCCAACGTGCGTTGGAGTTCATTGTGGATGAGATCTTCAAAGGAACCAGAGACCTTATGAGCCCTATGAACCTTAGCACCATCATGGCAATCGACTCCAACATCTAA 1272 0.4638 MAFSIQNLDPTVAMHHLTTALRPGPFVNSICNQVHANGRTGRVPQPGHDSGNIIKLMSSTMRVVLVMATMVVAVIVVDPKRTEGTRAFFVFGDSLVDSGNNNYLPTPARADSPPYGIDYPTHRPTGRFSNGLNLPDLISKRIGSEPTLPYLSPELNGQKLLVGANFASAGTGILNDTGIQFVGILRMFQQFALFVEYQQRLSEVVGSERAKRVVNGALVLMTLGGNDFVNNYFFTPITPRSHQFSVPQFSTYLIYEYRKILMRLYELGARRVLVTGTGPLGCIPSQLAQRSSNGECVPELQQATQIFNPMLLQMTTNLNSQLGSDIFVAVNAFLMNINFISNPQEYGFVTSKVACCGQGRFNGVGLCNPLSSVCPNRDLYAFWDAFHPSQRALEFIVDEIFKGTRDLMSPMNLSTIMAIDSNI* 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g0096 423 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 61 420 - -
Apr4g0096 423 CDD SGNH_plant_lipase_like 87 403 IPR035669 -
Apr4g0096 423 Pfam GDSL-like Lipase/Acylhydrolase 89 399 IPR001087 GO:0016788
Apr4g0096 423 Gene3D SGNH hydrolase 79 406 IPR036514 -
Apr4g0096 423 PANTHER GDSL LIPASE/ACYLHYDROLASE FAMILY PROTEIN (AFU_ORTHOLOGUE AFUA_4G14700) 61 420 - -
Apr4g0096 423 SUPERFAMILY SGNH hydrolase 88 408 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g0096 Apr-Chr4 860608 867322 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g0096 87 417 Acyl Lipid Metabolism Gene Families AT4G10950 32.733 5.18e-58 193
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g0096 - - aprc:113860789 844.728
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g0096 4 860608 867322 Apr8g0391 8 3319471 3321745 PCT