Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g0381 ATGTCAAACCTCTGCACTATGATTTCTTCGACCTTCACACAACCATTTCTCAACTCTTACTACAACTTTGGGTCGAGGAGGCCTCGCTGCAGGGCCAACATGTGCTCGCAACCTCAAAACGACGTCGTTATAGGGTGTGGAGGGGTTTCCATCGATTTCTTGGCCACCGTTGCTGCTTACCCTAATCCAGATGACAAAATCAGAAGCACCAGTTTAAAGGTTCAAGGAGGTGGTAATGCTGGCAATGCTTTAACCTGTCTTGCTCGCTTGGGCCTAAAACCAAGGCTCATATCTAAGGTTGCTGATGACAGTCAAGGGAGGGGAATATTAGATGAGCTACAGGATGATGGTGTAGATACATCCTTTATTGTGGTATCTAAGGAGGGAACTTCACCATTTACATATATTATTGTGGACAGCCAAACGAAGACCCGAACTTGTATACATACCCCTGGACATCCTCCGATGATACCAGACGACCTTACAGAATCAAGTTTGTTATCTGCATTGGACGGAGCAAGAATTGTATATTTTGATGGGAGGTTGTATGAAACTGCTCTTGTCGTTGCTCATGAGGCAGTTAGGAAGAATATACCCATCTTAATTGATGCAGAAAGGCCAAGGGAAGGGTTGGATGATCTCCTGAAATTAGCTGATTATGTTGTATGTTCAGCGAAGTTTCCGAAGGTATGGGCAGATGCATCAACTATTCCACAAGCACTTGTTTCTATGCTTTTAAGGTTGCCCAACATAAAATTTGCGATTGTTACTTTGGGAAAAGACGGTTGTATAATGCTTGAGAGAAGTATAAATGGTCCTTCCACAGAAGAAGTGGATGTAGACAGCTTATTGGAATCACTGGAGTTGAGAAAGAATAAGAGTGTATCAGTTCCAACCTGCATATCATCATCAGTGGCAAAATTGAAGGCAGAGGGGATAGGAACCGTTTGTGGGAAGTTATACATTGGAACAGCTGAGAGCATTCCATCATCAGAGCTCGTTGATACCACTGGTGCTGGGGATGCATTTATTGGAGCAGTTATCTATGCTATCTGTGCCAAGTTTTCACCAGAGACAATGCTATCTTTTGCTGCTAATGTGGCAGGTGCCAAGTGCAGAGATCTAGGAGCACGAAGTGGTCTTCCCTACCGTGCAGACCCACGCTTAGCATCCTTTATTCACTAG 1185 0.4414 MSNLCTMISSTFTQPFLNSYYNFGSRRPRCRANMCSQPQNDVVIGCGGVSIDFLATVAAYPNPDDKIRSTSLKVQGGGNAGNALTCLARLGLKPRLISKVADDSQGRGILDELQDDGVDTSFIVVSKEGTSPFTYIIVDSQTKTRTCIHTPGHPPMIPDDLTESSLLSALDGARIVYFDGRLYETALVVAHEAVRKNIPILIDAERPREGLDDLLKLADYVVCSAKFPKVWADASTIPQALVSMLLRLPNIKFAIVTLGKDGCIMLERSINGPSTEEVDVDSLLESLELRKNKSVSVPTCISSSVAKLKAEGIGTVCGKLYIGTAESIPSSELVDTTGAGDAFIGAVIYAICAKFSPETMLSFAANVAGAKCRDLGARSGLPYRADPRLASFIH* 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g0381 394 CDD ribokinase_group_B 42 383 - -
Apr8g0381 394 Pfam pfkB family carbohydrate kinase 48 268 IPR011611 -
Apr8g0381 394 Pfam pfkB family carbohydrate kinase 325 382 IPR011611 -
Apr8g0381 394 Gene3D - 42 379 IPR029056 -
Apr8g0381 394 PRINTS Ribokinase signature 45 66 IPR002139 GO:0016301
Apr8g0381 394 PRINTS Ribokinase signature 72 91 IPR002139 GO:0016301
Apr8g0381 394 PRINTS Ribokinase signature 254 265 IPR002139 GO:0016301
Apr8g0381 394 PANTHER PHOSPHOTRANSFERASE SYSTEM TRANSPORT PROTEIN 36 393 - -
Apr8g0381 394 ProSitePatterns pfkB family of carbohydrate kinases signature 2. 335 348 IPR002173 GO:0016773
Apr8g0381 394 SUPERFAMILY Ribokinase-like 43 386 IPR029056 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g0381 Apr-Chr8 3205062 3211099 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g0381 - - gmx:100802550 653.669
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g0091 4 785736 791696 Apr8g0381 8 3205062 3211099 PCT