Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g0091 ATGGCTTGCATGTTCAGTCCTTTCGGTGTATTCAATGGAAGCATCCTCAACTTCAACTCACCTCATTGCTTCAATTTCCGTCGCACAACAAAAGTCAAAATGTCCTCCGACGCCCTTCCTCCTCTTCCCGATAACCGCATCGTCGTTGGGTACGGAATGACGACGGTGGATTTTCTGGCCACGGTGGATGGATATCCGAAACCAGACGACAAGGTGAGAACGACGTCTTTCAAGGTTCAAGGAGGTGGCAATGCCGGCAATGCTTTAACCTGTGCTGCTCGACTCGGCTTGAAACCCAGACTCATCTCCAAGGTTGCAGATGATGCCCAAGGCGCCAGCATTTTGGAGGAGTTAGAAGCCGACGGTGTCGATACCTCCTTCATTGTCGTATCCAAAGGAGGTAGTTCAACATTTTCGTATGTGCTAGTTGACACCAAAACAAAAACTCGCACAAGTATATACACCCCAGGAGATCCTCCCATGATGCCAGATGACCTGTCCCAGTCAACATTATTCTCTGCTTTTGATGGAGCAAAATTGGTTTATTTCGATGGAATGTTCCCCAAAACTGCTTTATTTGTTGCCCAAGAGGCAGCTCGCAATAATCTTCCTATTTTAGTTGAAGCAGAATCACCAAGGGAAGGGTTGGATGAGGTCTTGAAGCTTGCTGATTTTGTTATATGCTCTACAAGGTTTCCACAGGCTTGGACACGAGCACCATCTATCCCGAGTGCACTGGTTTCCATGCTTTTAAGGTTGCCAAATATCAACTTTGTGATTGTGACTTTGGGTGAAGATGGTTGTCTAATGTTAGAAAGAAGTGAAAATGTGGATGCTGACATAGAAGAAAGAGATGTAGAGAGTTTCTTAGAATTCTTTTATAAAGAGAAAGATGATAGCTTGGCTATACCTACCTGTTTATCATCGGCGGTGACCAAATTCAGAGCAAATGGAGTGGGGACAATTTGTGGGAGATTCTTTATTGGAACAGCAGAGAAGATACCAGATTCTGAGCTGATTGATACAACTGGTGCTGGGGATGCGTTTATTGGAGCTATTATGTATGCTATATGCGCAAACATGGATCCGGAGAAAATGTTGCCATTTGCTGCTCAAGTGGCAGCCGCCAAGTGTAGAGCTTTGGGAGCTCGAACTGGTCTTCCACATCGTACAGATCCACGCTTGGCATCCTTTTTATGCTAA 1203 0.453 MACMFSPFGVFNGSILNFNSPHCFNFRRTTKVKMSSDALPPLPDNRIVVGYGMTTVDFLATVDGYPKPDDKVRTTSFKVQGGGNAGNALTCAARLGLKPRLISKVADDAQGASILEELEADGVDTSFIVVSKGGSSTFSYVLVDTKTKTRTSIYTPGDPPMMPDDLSQSTLFSAFDGAKLVYFDGMFPKTALFVAQEAARNNLPILVEAESPREGLDEVLKLADFVICSTRFPQAWTRAPSIPSALVSMLLRLPNINFVIVTLGEDGCLMLERSENVDADIEERDVESFLEFFYKEKDDSLAIPTCLSSAVTKFRANGVGTICGRFFIGTAEKIPDSELIDTTGAGDAFIGAIMYAICANMDPEKMLPFAAQVAAAKCRALGARTGLPHRTDPRLASFLC* 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g0091 400 PRINTS Ribokinase signature 50 71 IPR002139 GO:0016301
Apr4g0091 400 PRINTS Ribokinase signature 77 96 IPR002139 GO:0016301
Apr4g0091 400 PRINTS Ribokinase signature 259 270 IPR002139 GO:0016301
Apr4g0091 400 Pfam pfkB family carbohydrate kinase 48 278 IPR011611 -
Apr4g0091 400 Pfam pfkB family carbohydrate kinase 332 389 IPR011611 -
Apr4g0091 400 PANTHER PFKB FAMILY CARBOHYDRATE KINASE 28 399 - -
Apr4g0091 400 PANTHER PHOSPHOTRANSFERASE SYSTEM TRANSPORT PROTEIN 28 399 - -
Apr4g0091 400 CDD ribokinase_group_B 47 389 - -
Apr4g0091 400 Gene3D - 47 385 IPR029056 -
Apr4g0091 400 SUPERFAMILY Ribokinase-like 47 392 IPR029056 -
Apr4g0091 400 ProSitePatterns pfkB family of carbohydrate kinases signature 2. 341 354 IPR002173 GO:0016773
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g0091 Apr-Chr4 785736 791696 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g0091 - - gmx:100792838 661.759
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g0091 4 785736 791696 Apr8g0381 8 3205062 3211099 PCT