Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g0343 ATGGCTACGAAAGTTGCATTCCGAGCAGAAACATTTATGCTGTTACTGCTTCTTCTCCCTTTCTCCTTCTCCCAATCGATTTCTCATTCTCACTCTTCCGCCGCCATCGATCTCTTCGCTCCGACTCACGGACTCTTCCCAAGTTTAGAAGATGCGTACGAGGCGCTTAGAGTTTTTGAAATTCTCGGAATCGAAAAGAAGCCTCTTGCCAGCGCAGAGACTTGTCAGAAAGTGTTGGAAAATCTACGCTCGTCTTCCCCGCTTAAGGATTTGTTCTATGCCTTGAAAGTAAATGGCATGTTAAAATGCAACGTTAATGGGGAAGTTTTGAAGGATATTGCTTCGGGACTTAAAGCCACTGTTCATGATGCAAGTACTTTGCTTGACATATATTACTCAATAGGAGGTTTGGTTCTTATAAAGGATCAGGATTCTAAGGTTGATGTGCTTCTTGCTGATGCTGATGGGATTTTTCAATCAATCAAGGCACTAAGTCAAAGCGACGGAAGATGGCGCTATAGTTCTGATAATCCAGAGTCTAGTACCTATGCTGCTGGATTGGCACTTGAAGCACTTGCTGGAGTGATCTCACTAGCATCTTCTAAAATTGATCAGTCTAAGGTCAATATAGTGAAAAATGACATAGTGAAGCTTTTTGACAGAATTGAGAAATATGATGATGGAAACTTTTATTTTGATGAGAAATTTGTTGGTGGACTTGAGCATCAAGATTCTCTTTCCACAACTTCTTCAGTTGTTCGAGGGGTTACTGCATTTGCTGCTTTAACTTCAGGAAAAATAAATCTTCCAGGGGATAAAATATTGGGTTTGGCAAAATTTTTCTTGGGCATTGGAGTCCCAGGAGATGCTAAGGACTTCTTCAATCAAGTTGAAGCATTAGCTTTTCTAGAGAACAACAGGATTTCCATCCCATTGATATTGTCAATCCCTGAAACAGTTTATTCATTGACCAAAAAAGGCCAACTTAAGGTTAGGGTGAATACAGTGCTTGGTTCAGCTGCACCACCTCTAACAGTTAAGATTGTCCGTGCTTTTAGTACTGCTGCAAAAGATTCAGCTATTATTGACAGCAAGGAACTCCAGTATGACCAAAAAAGTGGATTTCATGTCTTGGATGCTTTCCTGAAGAATGTGGATGTGGGGACATATGTGTTTGTTTTTGAGATTGTGCTTCATCATGCGGACAGTGAAAAAGTTTATGCAACTGGAGGCCAAATTCATGTACCAATATATGTCACTGGAATTATTGAAGTTAGCAATGCAGAAATTGTAGTTCTGGACAGTGATCTTGGAAGTGCTGAAACCCAGAAAATGCTAGATTTGGGTGGAAACGATGCTTTATCGCTCTCAGCTAACCATCTGCAAAAGTTGAGGTTTTCTTTCCAATTGGCAACTCCTCGTGGTCAAGTTTTTAAGCCTCATCAGGCACTTCTCAAGTTGAGACATGAGACAAAGGTTGAACACGTCTTTGTGGATTTTCTTGGCTTGGTGGAGAAACTTTTTTATCTCTCAGGCAGATATGACATTGAGCTAACTATTGGCGATGCTGTCATGGAGAACTCTTTCTTAAGGCTTCTTGGCCATGTGGAATTAGATCTTCCAGAGGCACCTGAGAAAGCAGCCCGTCCTCCGCTGCCACCTGTTGACCCTTACTCAAGATATGGGCCCAAAGCAGAGATTATCCATTTGTTCAGGGCTCCTGAAAAGCGTCCACCCCAGAACCTCTCTCTTGCTTTCTTGGGTTTGACCCTTTTGCCATTCATTGGTTTTTTGGTTGGGTTATTGCGTTTAGGGGTGAACCTAAAGAATTTCCCTGGTTCAGCAGTACCTGCTACATTTGGAATCCTTTTCCATCTTGGTATTGCTGCAGTTTTGTTTCTTTATGTACTTTTCTGGTTGAAGCTGGACCTGTTCACTACACTCAAAACACTTGGTCTTTTGGGAGCTTTTTTGATGTTTGTGGGACACAGAATTCTTTCCCATATTGCTTTGACATCAGCCAAGTTAAAATCTGCATGA 2040 0.4157 MATKVAFRAETFMLLLLLLPFSFSQSISHSHSSAAIDLFAPTHGLFPSLEDAYEALRVFEILGIEKKPLASAETCQKVLENLRSSSPLKDLFYALKVNGMLKCNVNGEVLKDIASGLKATVHDASTLLDIYYSIGGLVLIKDQDSKVDVLLADADGIFQSIKALSQSDGRWRYSSDNPESSTYAAGLALEALAGVISLASSKIDQSKVNIVKNDIVKLFDRIEKYDDGNFYFDEKFVGGLEHQDSLSTTSSVVRGVTAFAALTSGKINLPGDKILGLAKFFLGIGVPGDAKDFFNQVEALAFLENNRISIPLILSIPETVYSLTKKGQLKVRVNTVLGSAAPPLTVKIVRAFSTAAKDSAIIDSKELQYDQKSGFHVLDAFLKNVDVGTYVFVFEIVLHHADSEKVYATGGQIHVPIYVTGIIEVSNAEIVVLDSDLGSAETQKMLDLGGNDALSLSANHLQKLRFSFQLATPRGQVFKPHQALLKLRHETKVEHVFVDFLGLVEKLFYLSGRYDIELTIGDAVMENSFLRLLGHVELDLPEAPEKAARPPLPPVDPYSRYGPKAEIIHLFRAPEKRPPQNLSLAFLGLTLLPFIGFLVGLLRLGVNLKNFPGSAVPATFGILFHLGIAAVLFLYVLFWLKLDLFTTLKTLGLLGAFLMFVGHRILSHIALTSAKLKSA* 680
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g0343 679 Pfam Oligosaccharyltransferase subunit Ribophorin II 22 670 IPR008814 GO:0006487|GO:0008250|GO:0016021
Apr8g0343 679 PANTHER RIBOPHORIN II 23 679 IPR008814 GO:0006487|GO:0008250|GO:0016021
Apr8g0343 679 PANTHER DOLICHYL-DIPHOSPHOOLIGOSACCHARIDE--PROTEIN GLYCOSYLTRANSFERASE SUBUNIT 2 23 679 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g0343 Apr-Chr8 2909317 2916626 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g0343 K12667 - gmx:100814831 1061.98
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr8g0343 8 2909317 2916626 Apr8g0343 8 2909317 2916626 ECH
Apr4g0039 4 382537 392108 Apr8g0343 8 2909317 2916626 PCT