Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g0039 ATGCTGCTTCCGCGAATGGCCAAAAACCTAGGAGGATTACTGGCACTACTTCTCGCTATTTCGATCTGCGGAGCCGTAACGATTCCTGGCCCTATATCCGATTCTCACCGTTCTGCAGCTTTAGAACTCTTCGATGGATCCTTTTCAAGTTTGGAAGATGCCTATGAGGCCCTAAGAGTTTTTGATATTCTTGCAATTGGGAAAAAGCCTAATGTGAGCACAGCCGCTTGTCAGAAAGTATTGGAAAATCTTGGGTCGTCATCCCCTCTTAAGGATTTGTTTTATGCCTTAAAGGTTAATGGCATATTAAAATGCAAGGTTAATGGGGATGTTTTCAAGGATATTGCTTCAAGGCTTAAAGCTACTATCAATGATGCAAGTACTTTGGTTGACATGTACTACTCAATAGGAAGTTTACTTCTTATAAAGGATCAGGCTTCTGATGTTGATGTGCTTCTTACTGATGCTGATGGGACTTTCCATTCAATCAAGGCTCTAAGCCAAAGTGATGGAAGATGGCGCTACAGCTCAGATAATCCAGAGTCTAGTACCTATGCTGCTGGATTAGCACTTGAAGCACTGGCTGGAGTAATCTCATTAGCATCTTCTGAAATTGATCAGTCTAGGGTGAGTGCAGTGAAAAATGATATATTGAAGCTTTTTGATGGCATTGAGAAATATGATGATGGGTCCTTCTATTTTGATGAGAAATTTGTTGGTGGACATGAGCATCAGAATTCTCTTTCCACTACTTCTTCTGTTGTTCGAGGGGTTACAGCATTTGCTGCTGTTACTTCTGGAAAAATAAATCTTTCAGGGGATAAAATATTGGGTTTAGCAAAATTTTTCCTAGGCATTGGAATCCCAGGAGATGCCAAGGATTTCTTCAATCAAGTTGAATCATTAGCTCTTCTAGAGAACAACAGGGTTTCTATCCCATTGATTCTGTCACTTCCTGCAACAGTTTATTCATTATCCAAAAAAGATCAGCTCAAGGTTAGGGTGAATACAGTACTTGGTTCAGTTGCACCACCTCTAACTGTTAAACTTGTCAAAGCTTTCCACACTGATGCTAAAGGTTCAGCTATTATTGAGAGCAAGGAGCTCCAATATGATAAAAAGAGTGGACTTCATGTCTTGGATGTTTTTCCAGATATGGTGGACGTGGGAACCTATGTGTTTGTTTTTGAGACGATGCTTCATGATTCTGCTGGTGAAAAAGTTTATGCTACTGGAGGCCAAATTCATGTACCAATATATGTCACTGGCATTATTAAAGTTAGCACTGCAGAAATTGCAGTTCTTGACAGCGATCTTGGAAGTGTTGAAACCCAGAAGATGTTAGATTTGGCAGGAAAGGATGTTATTTCACTCTCAGCTAACCACTTGCAAAAGTTGCGCTTTTCTTTTCAATTGACAACACCTCATGGTCATGCTTTTAAGCCCCATCAGGCATTTTTCAAGTTGAGGCATGAGACAAAATATGAACACATCTTTGTGGTTGGAAATACCGGCAAGAAGTTTGAGATTATTCTTGATTTTCTTGGTCTGGTAGAGAAATTTTATTACCTCTCAGGCAGATATGACATTGAGCTGACTGTTGGTGATGCTGTCATGGAAAATTCTTTCTTATGGACACTTGGCCGTGTTGAATTAGATCTTCCAGAAGCACCTGAGAAGGCAGCCCGTCTTCCTCCACTCCCTGTCGATCCATACTCAAGATATGGACCCAAGGCAGAGATAACCCACTTATTCAGGGCTCCTGAAAAGCGACCACCCCAGCAACTCTCTCTTACTTTCTTGAGTTTGACCCTGTTGCCATTTGTTGGCTTTTTGGTTGGGCTGTTACGCTTGGGGGTGAACTTGAAAAATTTTCCTTCTTCAGCAGCACCTGCTACATATGCCATCCTGTTCCATCTTGGCATTGGTGCAGTTCTATTGCTTTATGTTCTTTTCTGGTTGAAGCTGGATTTGTTCACTACACTCAAAACTGTAGGGTTTTTGGGAGTTTTTCTGATATTTGTGGGACACAGAATTCTTTCCCATCTCGCTACAACATCAGCCAAGTTGAAGTCTGCATGA 2082 0.4121 MLLPRMAKNLGGLLALLLAISICGAVTIPGPISDSHRSAALELFDGSFSSLEDAYEALRVFDILAIGKKPNVSTAACQKVLENLGSSSPLKDLFYALKVNGILKCKVNGDVFKDIASRLKATINDASTLVDMYYSIGSLLLIKDQASDVDVLLTDADGTFHSIKALSQSDGRWRYSSDNPESSTYAAGLALEALAGVISLASSEIDQSRVSAVKNDILKLFDGIEKYDDGSFYFDEKFVGGHEHQNSLSTTSSVVRGVTAFAAVTSGKINLSGDKILGLAKFFLGIGIPGDAKDFFNQVESLALLENNRVSIPLILSLPATVYSLSKKDQLKVRVNTVLGSVAPPLTVKLVKAFHTDAKGSAIIESKELQYDKKSGLHVLDVFPDMVDVGTYVFVFETMLHDSAGEKVYATGGQIHVPIYVTGIIKVSTAEIAVLDSDLGSVETQKMLDLAGKDVISLSANHLQKLRFSFQLTTPHGHAFKPHQAFFKLRHETKYEHIFVVGNTGKKFEIILDFLGLVEKFYYLSGRYDIELTVGDAVMENSFLWTLGRVELDLPEAPEKAARLPPLPVDPYSRYGPKAEITHLFRAPEKRPPQQLSLTFLSLTLLPFVGFLVGLLRLGVNLKNFPSSAAPATYAILFHLGIGAVLLLYVLFWLKLDLFTTLKTVGFLGVFLIFVGHRILSHLATTSAKLKSA* 694
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g0039 693 PANTHER RIBOPHORIN II 4 693 IPR008814 GO:0006487|GO:0008250|GO:0016021
Apr4g0039 693 SUPERFAMILY Terpenoid cyclases/Protein prenyltransferases 121 252 IPR008930 -
Apr4g0039 693 PANTHER DOLICHYL-DIPHOSPHOOLIGOSACCHARIDE--PROTEIN GLYCOSYLTRANSFERASE SUBUNIT 2 4 693 - -
Apr4g0039 693 Pfam Oligosaccharyltransferase subunit Ribophorin II 13 685 IPR008814 GO:0006487|GO:0008250|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g0039 Apr-Chr4 382537 392108 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g0039 K12667 - gmx:100806815 1157.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g0039 4 382537 392108 Apr4g0039 4 382537 392108 ECH
Apr4g0039 4 382537 392108 Apr8g0343 8 2909317 2916626 PCT