Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g0332 ATGGATTTCATGGAGAAGCTTAAAATTTGGAAGAGAAAAACAGAGAAAGAAGGTGAAGGTCCACCCCTGTTATGGTTCGAAACCTCTGTCTCTGTTTGTCGCCGCTTCCAGTTTGAACCCAATTCCCAACTTTCCGTAAAGCTAGTTGGTGATTCCAGACCATTATACCACAAGATAGTTGAGTCTTTCCTCAATAAATTTTTCCCCTCAGGATATCCATATAGTGTGAATGAAGGCTACCTCAGATACACACAGTTTCGAGCACTGCAACACATTGCCAGTGCGGCGCTATCTGTGCTATCAACTCAGTCACTGCTATTTGCGGCAGGCTTGCGGCCTACTCCTGCACAAGCAACAGCTGTTAGTTGGATTTTAAAGGATGGTATGGAACATGTAGGGAAGCTAATATGTAGTAATTTGGGTGCAAGAATGGATTCAGAGCCTAAACGTTGGAGAATTTTAGCTGATGTGCTCTATGATTTAGGCACTGGTTTGGAAGTGTTTTCTCCCTTATGCCCACAGCTCTTTCTTCAAATGGCAGGCCTAGGAAATTTTGCCAAGGGAATGGCAGTTGTGGCAGCAAGAGCTACAAGATTACCTATATATTCTTCATTTGCTAAAGAAGGAAATCTAAGTGATCTATTTGCCAAAGGGGAGGCTATTTCAACTCTCTTTAATGTTGTTGGGATTGGAGTTGGAATTCAATTAGCGTCTACTATATGTACATCAATGCAAGGAAAGTTGATTGTGGGGCCGCTACTTTCTATTATACACATATACTGCGTTTCTGAAGAAATGAGAGCAACTCCTATCAATACCTTAAATCCACAAAGAACTGCAATGATTGTGGCTGATTTTCTCAAGACAGGAAATGTATCAAGTCCTGCTGATCTAAGATATCAAGAAGATTTGCTATTTCCCCAGCGACTCGTAAAAGATGCTGGAAATGTAAGAGTGGGTAGGGCTTTGCACAAGGTTATTAAGCCTTCAAGGTTTGTTGAACTAAAACAAGTACTCCCCGGGGAGAAGTTTCTTTTAAATGGTGAAAATGGATGCATTGACATGGTATTGGAGCATGATGCTATTGGTGAAGATGCTTTGAAAGGGTGGTTAGTTGCTGCATATGCTGTACAAATTAAAAAGTCCTCTCCTGAGATCAGTACCAGTGCACTGGTAAAGGCCTATGAGAAAATGAATGAGGTCTTTCCTGTGTTTTTAAAAGAATTACAGAGCAAAGGGTGGCATACAGATCGTTTTCTGGATGGAACTGGGAGCCGCTTTGCGTTGTAG 1290 0.4163 MDFMEKLKIWKRKTEKEGEGPPLLWFETSVSVCRRFQFEPNSQLSVKLVGDSRPLYHKIVESFLNKFFPSGYPYSVNEGYLRYTQFRALQHIASAALSVLSTQSLLFAAGLRPTPAQATAVSWILKDGMEHVGKLICSNLGARMDSEPKRWRILADVLYDLGTGLEVFSPLCPQLFLQMAGLGNFAKGMAVVAARATRLPIYSSFAKEGNLSDLFAKGEAISTLFNVVGIGVGIQLASTICTSMQGKLIVGPLLSIIHIYCVSEEMRATPINTLNPQRTAMIVADFLKTGNVSSPADLRYQEDLLFPQRLVKDAGNVRVGRALHKVIKPSRFVELKQVLPGEKFLLNGENGCIDMVLEHDAIGEDALKGWLVAAYAVQIKKSSPEISTSALVKAYEKMNEVFPVFLKELQSKGWHTDRFLDGTGSRFAL* 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g0332 429 Pfam Vitamin B6 photo-protection and homoeostasis 58 290 IPR006968 -
Apr8g0332 429 PANTHER PROTEIN ROOT UVB SENSITIVE 2, CHLOROPLASTIC 1 428 - -
Apr8g0332 429 PANTHER RUS1 FAMILY PROTEIN C16ORF58 1 428 IPR006968 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g0332 Apr-Chr8 2784357 2787947 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g0332 - - gmx:100814176 747.273
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr8g0332 8 2784357 2787947 Apr8g0332 8 2784357 2787947 ECH
Apr4g0025 4 251587 256097 Apr8g0332 8 2784357 2787947 PCT