Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g0025 ATGGATTTCTTGGAGAAGAAACAAGTGGAAGCTCCCTTGTTCTGGTTCGAAACCTCGGACTCTGTATGTCGCCGACACCAGTTTGAACCCGATGGTCAACTCTCTGTAATGCTTGTTCATGATTCCAGACCCTTATACCAAAGGGTTGCTGGATCTTTCATGAATAAGTTTTTCCCCTCTGGGTATCCATACAGTGTGAATGAAGGCTATCTCAGATACACACAGTTTCGAGCCGTGCAACATGTTACCAGTGCAGCACTATCTGTGCTATCAACTCAGTCACTGCTATTTGCTGCAGGGTTGCGGCCCACTCCTGCGCAAGCAACTGCTGTTAGTTGGATTTTAAAGGATGGAATGCAACATGTAGGAAAGCTAATATGTAGCAATTGGGGCGCTAGAATGGATTCTGAGCCTAAACGTTGGAGACTACTAGCTGATGTGCTTTATGATTTAGGCAGTGGTTTGGAAGTGCTTTCTCCATTATGCCCACATCTTTTTCTTGAAATGGCAGGCCTAGGAAATTTTGCAAAGGGGATGGCAGTTGTTGCAGCTAGAGCTACAAGATTGCCTATATATTCTTCATTTGCTAAAGAAGGAAATCTCAGTGACCTATTTGCTAAAGGGGAGGCTTTTTCAACACTCTGTAATGTTGTTGGAATCGGAATTGGCATTCAATTAGCATCTACTATCTGTGCATCAATCCAAGGAAAGTTGGTTGCGGCTCCTCTCCTTTCAATTATACATATATACAGTGTGTCTGAAGAAATGAGAGCAACTCCTATCAATACCTTGAATCCACGAAGAACTGCAATGGTTGTTGCTGATTTTCTCAAGGAAGGAATTGTATCAAGCCCTGCTGATCTAAGATACAGAGAAAATTTGCTGTTTCCTCTGCAACTCAAAGAAGATGTGGAGAATGTAAGAGTGGGAAGGGCTTTGCACAAGGTCATTAGGCCTTCCAAGCTTCTTGAATCAAAACAAGTGTTTCCTAAGGAGAATTTTCTTTTAAATTGTGGGAATAAATGCATTGACATGGTGTTGGAGCAAGATGCTAGTGGTGAAGATGCATTGAGAGGGTGGCTAGTTGCTACATATGCTGCACAAAGTGAGAGTTTTCCTCATGAGCTCAGTGCTAATGTCCTGCAAGAGGCCTATGAGAACATGAATAGTGTGTTTCCTGTATTTTTAAAAGAATTACAGAACAAAGGGTGGCACACTGATCGTTTTCTGGATGGAACTGGGAGCCGCTTTGCATTCTAG 1260 0.427 MDFLEKKQVEAPLFWFETSDSVCRRHQFEPDGQLSVMLVHDSRPLYQRVAGSFMNKFFPSGYPYSVNEGYLRYTQFRAVQHVTSAALSVLSTQSLLFAAGLRPTPAQATAVSWILKDGMQHVGKLICSNWGARMDSEPKRWRLLADVLYDLGSGLEVLSPLCPHLFLEMAGLGNFAKGMAVVAARATRLPIYSSFAKEGNLSDLFAKGEAFSTLCNVVGIGIGIQLASTICASIQGKLVAAPLLSIIHIYSVSEEMRATPINTLNPRRTAMVVADFLKEGIVSSPADLRYRENLLFPLQLKEDVENVRVGRALHKVIRPSKLLESKQVFPKENFLLNCGNKCIDMVLEQDASGEDALRGWLVATYAAQSESFPHELSANVLQEAYENMNSVFPVFLKELQNKGWHTDRFLDGTGSRFAF* 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g0025 419 PANTHER PROTEIN ROOT UVB SENSITIVE 2, CHLOROPLASTIC 6 419 - -
Apr4g0025 419 PANTHER RUS1 FAMILY PROTEIN C16ORF58 6 419 IPR006968 -
Apr4g0025 419 Pfam Vitamin B6 photo-protection and homoeostasis 48 279 IPR006968 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g0025 Apr-Chr4 251587 256097 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g0025 - - gmx:100820508 749.584
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g0025 4 251587 256097 Apr4g0025 4 251587 256097 ECH
Apr4g0025 4 251587 256097 Apr8g0332 8 2784357 2787947 PCT