Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g0297 ATGCAGAAAGAGTCGAATGACAAACCCCCCACCTTCACACAGATCGTGGTGGTATCATCCATAGGGTTGATAGTTGCTGCAGCAATGCATTATCGCATTAAAAAAATTAGAGATCGAAAGATTATTCCTCGTCTCAGATTATCAAAGGCAAGCCAAACCCCAAAGCTTGAGAAGTTCTCTCATTACGTAGCTAGGCAAATGGGGTTCAAAGACAGGAGAAGTTGTCCTCATCTTTGTAAATTGGCTTCTGAATATATAAGAAAATCCGAGGGATGTGAAAATGATATCTACGCCTTCTTCGAGAATGAACCAGATGCAGATTCACTTTTTGTGAAGCTGGTAGAGGAGTTTGAGAGATGCATTCTTAGTTACTTTGCATTCCATTGGAGCCATGGTGATGCCATGATCAGTCAGGTATTGAGCACCGACACTGAGCCAAAAACGAAGCTCAAGCACATAGTTATGGCGGCAACTAGGGAACTAAGGTTCGAGAGAGTGACCAAGAATCTGAAGGTGGCAAGAGTTTTTAACACATTAGTTGAAGAGATGAAAGCAATGGGACTGGTAACAAATGATGACTCTCGATGCACAGAGGTGATGGCTCCCGTAGCTCACAGTGATAGGAGCCCAGTGCTTCTCTTCATGGGAGGTGGTATGGGAGCTGGCAAGAGCACAGTGCTTAAGGACATTCTTAAAGAACCTTTCTGGGTAGGAGCAGCAGGCAATGCTGTCATCATTGAGGCAGATGCCTTCAAAGAATCAGATGTCATCTACAAGGCCCTTAGTTCAAGAGGGCATCACGACATGATTCGAACAGCTGAACTGGTACACCAATCATCCACAGATGCGGCCTCATCCCTCCTGGTAACAGCACTTAATGAGGGGAGGGATGTAATCATGGATGGCACACTCTCCTGGTTACCATTTGTTGTGCAGACCATAACAATGGCCAGAAATGTCCACCGCCGCCGTTACCGCATGGGAGCTGGCTACAGGGTAAAAGAGGATGGAACTGTAACCGAAAACTATTGGGAACGAGCTGAGGATGAAGAGCCTGAACAAGTTGAAGGCAAAAAGAGAAAACCATATAGGATAGAGCTGGTCGGAGTAGTATGTGATGCTTACCTTGCAGTAATTCGAGGCATAAGGAGAGCTATCATGTGTCGAAGAGCAGTGAGAGTGAAGTCACAATTGAAATCCCACAAGAGATTTGCTGAAGCATTTCTGACTTATTGTCAGCTAGTAGACAGTGCTAGGCTGTACTGTACAAATGCTTTGGAAGGGCCCCCTAAGATGATAGGATGGAAAGAAAGAGACAAGACGCTGCTTGTTGATCCAGATGAAATCGATTGTTTGAAGAGGGTTTCTAGGTTGAATGAAGATGCCAACTCCATATATGAACTTTACAAGCACCCCAACCCAGCTTGTGAAGCTGGATCGATATGGAAAGACATTGTATTATCTCCTTCAAGGGTGAACATCCAACAGGAGCTGAAGTACTCAATCCAAAAGGTGGAGAGATTGAAATGA 1530 0.4484 MQKESNDKPPTFTQIVVVSSIGLIVAAAMHYRIKKIRDRKIIPRLRLSKASQTPKLEKFSHYVARQMGFKDRRSCPHLCKLASEYIRKSEGCENDIYAFFENEPDADSLFVKLVEEFERCILSYFAFHWSHGDAMISQVLSTDTEPKTKLKHIVMAATRELRFERVTKNLKVARVFNTLVEEMKAMGLVTNDDSRCTEVMAPVAHSDRSPVLLFMGGGMGAGKSTVLKDILKEPFWVGAAGNAVIIEADAFKESDVIYKALSSRGHHDMIRTAELVHQSSTDAASSLLVTALNEGRDVIMDGTLSWLPFVVQTITMARNVHRRRYRMGAGYRVKEDGTVTENYWERAEDEEPEQVEGKKRKPYRIELVGVVCDAYLAVIRGIRRAIMCRRAVRVKSQLKSHKRFAEAFLTYCQLVDSARLYCTNALEGPPKMIGWKERDKTLLVDPDEIDCLKRVSRLNEDANSIYELYKHPNPACEAGSIWKDIVLSPSRVNIQQELKYSIQKVERLK* 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g0297 509 Gene3D - 193 429 IPR027417 -
Apr8g0297 509 Pfam Zeta toxin 204 316 IPR010488 GO:0005524|GO:0016301
Apr8g0297 509 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 205 340 IPR027417 -
Apr8g0297 509 PANTHER UNCHARACTERIZED 4 509 IPR044802 -
Apr8g0297 509 PANTHER P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASES SUPERFAMILY PROTEIN 4 509 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g0297 Apr-Chr8 2468491 2471809 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g0297 - - mtr:MTR_1g070385 887.486
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g0003 4 15971 20572 Apr8g0297 8 2468491 2471809 PCT