Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g0003 ATGGGAGATATGCAGAAAGATCTTAATGCCAAACCAAGTTTCACACAGATCATCGTAGCCTCTTCTATTGGATTGATATTTGCAGTGGCCATGCATTATCGTCTTAAAAAGATTAGAGATCGAAAGATCATCCCACATCTAAGATCATCACGCTCAGGCCACTTACCAAAGCTTGAAAGGTTCTCACATTACGTAGCTAGGCAAATGGGGTTCAAAGACAGGAGGAGTTGTCCTCATCTATGTAGATTGGCTTCCGAATACATAAGGAAATGCGAGGGATGCGAAGATGATATATATGCCTTCTTTGAGAAGGAACCAGATGCGGATTCACTGTATGTGAAGCTGGTGGAGGAGTTTGAGAGATGCATTCTTAGTTACTTTGGATTCCATTGGAACTATGGTGATGTAATAATGAGTCAGGTGTTGAACTCGGAAAATGAGCCAAAGAAGAAGCTCAAGCACATAGTTATGGCAGCAACTAGGGAACAAAGGATCGAGAGAGTTGCGAAGAATCTGAAGGTTGCTAGTGTTTTTAATACATTGGTAGAAGAGATGAAAGCAATGGGAATTGCTGCAACTGATGACTCTCAATGTACAGAGGTGATGGCTCCAGTAGCTCATAGCGATAGGAGCCCAGTGCTTCTCCTAATGGGGGGAGGTATGGGTGCTGGCAAGAGCACTGTGCTCAAGGACATTCTCAAAGAACCTTTCTGGGCAGGAGCAGCAGGGAATGCCGTAGTCATTGAGGCAGATGCCTTCAAAGAATCAGATGTCATCTATAAGGCCCTTAGCTCAAGAGGTCACCATGACATGATTCGAACAGCAGAACTGGTACACCAATCATCCACAGATGCAGCCTCATCCCTCCTGGTAACAGCACTGAATGAGGGGCGGGATGTTATTATGGATGGCACACTCTCCTGGCTACCATTTGTGGTGCAGACAATAACAATGGCCAGAAATGTTCATCGACGCCGTTACCGCATGGGAGCTGGCTACAGGGTGAACAAAGATGGAACTGTAACTGAAAACTATTGGGAACGAACTGAAGATGAAGAACCTGAACAGGTTGGAGGCAAGAAGAGAAAACCATATAGGATAGAGTTGGTTGGAGTAGTATGCGATGCTTATCTTGCAGTCGTTAGAGGCATAAGGAGAGCAATCATGTGCAGAAGAGCAGTGAGAGTAAAGTCACAATTGAAATCCCACAGGAAATTTGCCGAGGCATTTATGACTTACTGTCAACTAGTAGATAACGCACGGCTATATTGCACAAACGTGTTGGAAGGCCCAGCCAAGTTGATAGGATGGAAAGATAGAGACAAGACACTGCTCGTTGATCCTGATGAAATCGACTGTTTGAAGAGGGTTGCCAAATTGAACGAAGATGCCGACTCCATTTATGAACTTTACAAGCATCCCAACCCAGCTTGTGAAGCTGGATCGGTATGGAAAGACATTGTGTTATCTCCTTCAAGGTTGAACATCCAACAGGAGCTCAAGTTTTCGATCCAAAAGATTGAGAGCTTGAAATGA 1536 0.4453 MGDMQKDLNAKPSFTQIIVASSIGLIFAVAMHYRLKKIRDRKIIPHLRSSRSGHLPKLERFSHYVARQMGFKDRRSCPHLCRLASEYIRKCEGCEDDIYAFFEKEPDADSLYVKLVEEFERCILSYFGFHWNYGDVIMSQVLNSENEPKKKLKHIVMAATREQRIERVAKNLKVASVFNTLVEEMKAMGIAATDDSQCTEVMAPVAHSDRSPVLLLMGGGMGAGKSTVLKDILKEPFWAGAAGNAVVIEADAFKESDVIYKALSSRGHHDMIRTAELVHQSSTDAASSLLVTALNEGRDVIMDGTLSWLPFVVQTITMARNVHRRRYRMGAGYRVNKDGTVTENYWERTEDEEPEQVGGKKRKPYRIELVGVVCDAYLAVVRGIRRAIMCRRAVRVKSQLKSHRKFAEAFMTYCQLVDNARLYCTNVLEGPAKLIGWKDRDKTLLVDPDEIDCLKRVAKLNEDADSIYELYKHPNPACEAGSVWKDIVLSPSRLNIQQELKFSIQKIESLK* 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g0003 511 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 207 344 IPR027417 -
Apr4g0003 511 Pfam Zeta toxin 206 319 IPR010488 GO:0005524|GO:0016301
Apr4g0003 511 PANTHER UNCHARACTERIZED 1 511 IPR044802 -
Apr4g0003 511 Gene3D - 193 433 IPR027417 -
Apr4g0003 511 PANTHER P-LOOP NUCLEOSIDE TRIPHOSPHATE HYDROLASE SUPERFAMILY PROTEIN 1 511 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g0003 Apr-Chr4 15971 20572 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g0003 - - gmx:100794775 911.368
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g0003 4 15971 20572 Apr8g0297 8 2468491 2471809 PCT