Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Apr8g0286 | ATGGCAACCATCTCTGCTGCAACCACAACCCCATCCATCACACGGGCATGCCTTGTGCAAAAGCAGCCTCCTACCCTCTCATCTTCTCCCCTTCTTGGTTTGCCAACAATGGCTAAGGTGGGAAGAGTAAGGTGCTCCATGGAGGGAAAGCCTTCAGAGAAGGAAAGCAACTCAAGCATGGGGATGGGGGCATCTTTGGTAGCAGCTGCATGTGCTGCAGCCATGTCAGGCCCAGCAATGGCCTTGGTCGATGAGAGATTGAGCACTGAAGGAACTGGGCTTCCTTTTGGGCTCAGCAACAACCTTCTTGGTTGGATCTTGTTGGGTGTCTTTGGTCTTATATGGGCTTTCTATACTGTCTACACTTCCACGCTCGAAGACGATGAAGAGTCAGGATTGTCCCTCTAA | 408 | 0.5147 | MATISAATTTPSITRACLVQKQPPTLSSSPLLGLPTMAKVGRVRCSMEGKPSEKESNSSMGMGASLVAAACAAAMSGPAMALVDERLSTEGTGLPFGLSNNLLGWILLGVFGLIWAFYTVYTSTLEDDEESGLSL* | 136 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Apr8g0286 | 135 | Pfam | Photosystem II reaction centre W protein (PsbW) | 1 | 135 | IPR009806 | GO:0009507|GO:0009523|GO:0015979 | |
| Apr8g0286 | 135 | PANTHER | PHOTOSYSTEM II REACTION CENTER W | 1 | 135 | - | - | |
| Apr8g0286 | 135 | PANTHER | PHOTOSYSTEM II REACTION CENTER W PROTEIN, CHLOROPLASTIC | 1 | 135 | IPR009806 | GO:0009507|GO:0009523|GO:0015979 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Apr8g0286 | Apr-Chr8 | 2394937 | 2395971 | Wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Apr8g0286 | K02721 | - | gmx:100305788 | 183.341 |
Event-related genes