Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g0274 ATGGATGCAAAAATGGTTGCACAGTGCAAAAGTTCAACACTAAGTTTAGCTCGTTGGAAACCAAAACACCCTTCTGTGGTTGGAATGCTAGCAAGGCCTCTGGACGACAATGCAAGAGGAACAGGAAAAAGTAATGCGTACGAAGATAACTTGTTTGATCACATAGCTATAAACCGTTTATCAAAATCTTTTCAAGCGGCAACAGGTTTCAGAAATAGTAGAAGTGGGTATGAGAGTCTGGTAGAAGCAACTACCGTGGCTTCACAAAAGTTTAGTCCCATTCAACAACATCAACTTGCCATTGAAGCACTTGATAGAGCCTTCCCAAAGCCAATGCTTTTGTTGATAAGGACACTGCTACCACCATCATCTAGATTCGCAAGGAAATGGTATGCCATCTTCACAACTTTGCTCTTCGTCTGGTTAGTCGGGCCCTTAGAGGTCAGAGAATCGGAGGTCAACGGGAGAAGAGAAAAAAATGTAGTCCACATAAAAAAATGCAGGTTCTTAGAAGAGACAAACTGTGTAGGAATGTGTATCAATCTTTGCAAAATCCCATCTCAGTGTTATATAAAGGATTCCCTGGGTATGCCAGTGAACATGGTCCCGAATTTTGATGACATGAGTTGTGAGATGATATTTGGCCAAGATCCCCCGGAATCAAGTGATGATCCAGCTCTCAAGCAACCATGCTATAAACTATGCAAGGCCAAAAAAAGCCATGGAACGAATTGCCTCAGTTAA 744 0.4207 MDAKMVAQCKSSTLSLARWKPKHPSVVGMLARPLDDNARGTGKSNAYEDNLFDHIAINRLSKSFQAATGFRNSRSGYESLVEATTVASQKFSPIQQHQLAIEALDRAFPKPMLLLIRTLLPPSSRFARKWYAIFTTLLFVWLVGPLEVRESEVNGRREKNVVHIKKCRFLEETNCVGMCINLCKIPSQCYIKDSLGMPVNMVPNFDDMSCEMIFGQDPPESSDDPALKQPCYKLCKAKKSHGTNCLS* 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g0274 247 Pfam Beta-carotene isomerase D27-like, C-terminal 141 221 IPR025114 GO:0005506
Apr8g0274 247 PANTHER BETA-CAROTENE ISOMERASE D27, CHLOROPLASTIC 37 243 - -
Apr8g0274 247 PANTHER BETA-CAROTENE ISOMERASE D27 37 243 IPR038938 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g0274 Apr-Chr8 2249833 2256387 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g0274 K17911 - gmx:100782912 392.889
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g1030 4 8482980 8488814 Apr8g0274 8 2249833 2256387 PCT