Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g1030 ATGGAAGCAAATTGTTTTAGGTTGAACATTAGTTCTTCAACACTATGTTCATATCACTGCAGGAAGATTATCACAATTCACAACCCTTCTGTGGTTGCAATGCTTAGAAGGCCTTCAGATGACATTAGAGGAGAAACAGGAAAAACCAATGCCTACAAAGATAACTTATTTGATCGCTTAGCAATAAATCATCTATCAAAAAGCGTTCAAGCAGCTACAGGACTTGGTAATAATAAGAGTGGGTATGAGAGCTTGGTTGAGGCAGCTACTGCCGCTAAATTGAAATTTGATCCTATTCACCAGCAAGAGGTTGTGATTCAAGCTCTTGATAGAGCCTTCCCGAAGCCAATACTCTCATTGATAAAAACACTGCTACCACCATCTAAACTCGCACGGGAATATTTTGCCGCTTTCACGCCTTTATTCTTTGCATGGTTAGTCGGGCCCTCCGAGGTGAGAGAATCGGAGGTCAACGGGCGAAGGGAAAAAAATGTAGTCTTCATCAGAAAATGCAGGTTTTTAGAGGAGACAAATTGTGTAGGGATGTGTATTAATCTTTGCAAAATGCCATCTCAATCGTTTATAAAGGGCTCTCTGGGGATGCCAGTCAATATGGTCCCGAATTTTGACGATATGAGTTGTGAAATGATATTTGGACAAGATCCTCCAGCATCAACTGATGATCCAGCACTTAAGCAACCATGCTATAAACTATGCAAGACATATAAGAAACATGGACCGAACTGCCTCAATTAA 756 0.4074 MEANCFRLNISSSTLCSYHCRKIITIHNPSVVAMLRRPSDDIRGETGKTNAYKDNLFDRLAINHLSKSVQAATGLGNNKSGYESLVEAATAAKLKFDPIHQQEVVIQALDRAFPKPILSLIKTLLPPSKLAREYFAAFTPLFFAWLVGPSEVRESEVNGRREKNVVFIRKCRFLEETNCVGMCINLCKMPSQSFIKGSLGMPVNMVPNFDDMSCEMIFGQDPPASTDDPALKQPCYKLCKTYKKHGPNCLN* 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g1030 251 Pfam Beta-carotene isomerase D27-like, C-terminal 145 225 IPR025114 GO:0005506
Apr4g1030 251 PANTHER BETA-CAROTENE ISOMERASE D27 37 246 IPR038938 -
Apr4g1030 251 PANTHER BETA-CAROTENE ISOMERASE D27, CHLOROPLASTIC 37 246 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g1030 Apr-Chr4 8482980 8488814 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g1030 K17911 - gmx:100813404 395.971
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g1030 4 8482980 8488814 Apr8g0274 8 2249833 2256387 PCT