Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g0260 ATGAAGACTTTCTTTACTGCAGAATCCTGTAAAGAAGCACACCCTAATGCTTTAAATCCACAGTCCTGGCTCCAAGTTGAAAGGGGGAAGCTTCCCCAATTGTCATCATCCCAGTCCTCCACTGCATCAATAGAATCTCTGATCAAGGTCCCGCAACCACCTATACTTCCATTCTTTAAACCTGTTGATTATGTGGAAGTTTTAGCCCAAATCCATGAAGAACTTGAGTCGTGTCCTCTGCAGGAGCAGTCAAATCTGTTTTTGCTACAATACCAGGTCTTTAGGGGCCTTGGGGATGTTAAACTAATGCGCAGAAGCCTCCGGTCAGCTTGGCAGAGAGCAAACACTCTTCATGAGAAAATTATTTTTGGGGCATGGTTGAAGTATGGGAAGCAAGGGGAGGAACTAGTTGCTGACTTGCTCACGGCTAGTGGTAAATGTGAAAAGGAATCTGGGCCCATAGATATAGAATCTCATATTCCTTTTGGTATGAATGTAAATTCCCAGGAGAGAGCTGCGATGAATGGGAACCTCACTTCACAGTATGTTACTTTTACTATCGGAAATGAGAAGATAATCTGTGATAGACAGAAGATTTCTGAACTTTCAGCACCATTTCATGCAATGCTAAAGGGGTATTTCAGGGAATCACTTTCTGAGACTATAGATTTATCTGAAAACAATATCTCTCCCTCGGGTCTGAGGGCAATAAATTCCTTTAGCTTGACAGGCAGTTTACCTGATGTCCCTTCAAATCTTTTGTTGGAGATATTAGTTTTTGCAAACAAGTATTGTTGTGAAAGACTAAAACAGGCTTGTGATAGAAGACTTGCATCCTTAGTTTCCTCCAGAGAAGTTGCAGTGGAACTCATGGAATATGCTCTTGATGAGAATTCTGCTGTCCTTGCTGGGTCTTGTTTACAGGTCCTTTTACGTGATATTCCCAACTGCTTGAGTGATAATCAGGTGGTGGAGTTATTTATTCATGCTAATAGGCAACAGTTGGCAGTCATGGTTGGACCTGGCTTATTTGCACTTTTCTGTTTCTTAAGTGAAGTTTCTATGAACCTTAATTCTAGTTCAGACACAACAGCTCATTTACTGGAACGGTTAGTTGATTTTGCTGAAAATGACAAGCAGAGACTGCTGGCATTTCATCAGTTGGGATGTGTTCGACTCTTAAGAAAAGAATATGATGAAGCCTATTGTCTTTTTGAGAGGGCTGTAGATGCAGGTCATATTTATTCTGTTGTGGGTTTAGCTAGACTGGACTCTATAAAGGGAGAGAAGTTTTTATCTTATGAGAAGATCAGCTCAGTCATTTCTTCTGTTACACCACTTGGATGGATGTACCAGGAAAGATCACTATACTGTGACTGTGATTTGAGGTGGAAAGACCTTGAGAAAGCAACTGAACTGGACCCTACTCTTGTATATCCCTACATGTATAGGGCTGCCTCATTAATGAGGACAGAGAATGTTCAAGGTGCACTGGGTGAAATCAATCGGATTCTTGGCTTCAAACTTTCATTAGAGTGCCTGGAACTACGGTTTTTTATCTATCTGGGCCTTGAGGACTACAAAGCAGCTCTCCGTGATGTTCAAGCAATTCTTACCCTGTGTCCATATTATAGAATGTTTGAAGGGCGTGTGGCTGCATCTCAGCTCTGTACTCTTGTGCGTGCACATGTTGACCATTGGACAACGGCAGATTGTTGGGCACGATTATATGACTGTTGGTCTGCTGTAGATGATATTGAGTCTCTATCTGTTATCTACCAGATGCTTGAATCTGATGCAGCAAAAGGTGTTCTATACTTCAGACAGTCATTGCTTCTCCTCAGGTTAAACTGTCCAGAGGCTGCTATGCGGAGTTTACAGTTAGCTTGGCAACATGCATCAAGTGAGCATGAAAGACTTGTATATGAGGGGTGGATCTTGTATGATACAGGTCATTATGAGGAAGGGCTCCAAAAAGCTGAAGAGTCTATTAGTATTAAGAGGTCTTTCGAGGCCTATTTCCTGAAGGCGTATGCATTGGCTGACTCTAGCATAGATTCATCATATTCTTCAACTGTTATTTCACTTTTGGAAGATGCCTTGAAGTGCCCTTCTGATAACCTGCGCAAAGGTCAGGCCCTAAACAATCTTGGAAGTGTTTATGTTGATTGTGGGAAATTGGACTTAGCAGCTGATTGCTATATCAAAGCCCTTAAAATCCAGCACACCCGTGCCCATCAGGGCCTTGCTCGTGTTCATTTTCTAAAAAATGATAAGGCTGCTGCATACAAGGAAATGACCAATCTTATTGAGAAAGCAAAGAACAATGCATCGGCCTATGAGAAAAGGTCTGAGTATGGTGATCGTGAACTCACAAAGGCAGATCTGGAGACGGTGACTAGATTAGATCCACTTCGGGTGTATCCTTATAGATATCGGGCGGCAGTTTTGATGGACAGCCATAAGGAAGAGGAAGCTATTGCGGAACTCTCTAGAGCAATTGCATTCAAAGCTGATTTGCACCTTTTGCATCTGCGTGCAGCATTCCATGAACACAAGGGGGATGTCCTAGGTGCACTAAGAGACTGTCGAGCTGCACTCTCAGTAGACCCAAACCATCAAGAAATGTTGGAACTTCACAGTCGAGTTAATAGCCATGAGCCCTGA 2667 0.4256 MKTFFTAESCKEAHPNALNPQSWLQVERGKLPQLSSSQSSTASIESLIKVPQPPILPFFKPVDYVEVLAQIHEELESCPLQEQSNLFLLQYQVFRGLGDVKLMRRSLRSAWQRANTLHEKIIFGAWLKYGKQGEELVADLLTASGKCEKESGPIDIESHIPFGMNVNSQERAAMNGNLTSQYVTFTIGNEKIICDRQKISELSAPFHAMLKGYFRESLSETIDLSENNISPSGLRAINSFSLTGSLPDVPSNLLLEILVFANKYCCERLKQACDRRLASLVSSREVAVELMEYALDENSAVLAGSCLQVLLRDIPNCLSDNQVVELFIHANRQQLAVMVGPGLFALFCFLSEVSMNLNSSSDTTAHLLERLVDFAENDKQRLLAFHQLGCVRLLRKEYDEAYCLFERAVDAGHIYSVVGLARLDSIKGEKFLSYEKISSVISSVTPLGWMYQERSLYCDCDLRWKDLEKATELDPTLVYPYMYRAASLMRTENVQGALGEINRILGFKLSLECLELRFFIYLGLEDYKAALRDVQAILTLCPYYRMFEGRVAASQLCTLVRAHVDHWTTADCWARLYDCWSAVDDIESLSVIYQMLESDAAKGVLYFRQSLLLLRLNCPEAAMRSLQLAWQHASSEHERLVYEGWILYDTGHYEEGLQKAEESISIKRSFEAYFLKAYALADSSIDSSYSSTVISLLEDALKCPSDNLRKGQALNNLGSVYVDCGKLDLAADCYIKALKIQHTRAHQGLARVHFLKNDKAAAYKEMTNLIEKAKNNASAYEKRSEYGDRELTKADLETVTRLDPLRVYPYRYRAAVLMDSHKEEEAIAELSRAIAFKADLHLLHLRAAFHEHKGDVLGALRDCRAALSVDPNHQEMLELHSRVNSHEP* 889
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g0260 888 Gene3D Tetratricopeptide repeat domain 362 548 IPR011990 GO:0005515
Apr8g0260 888 SUPERFAMILY TPR-like 694 879 IPR011990 GO:0005515
Apr8g0260 888 Coils Coil 756 783 - -
Apr8g0260 888 PANTHER ETO1-RELATED 1 888 IPR044631 GO:0010105
Apr8g0260 888 Gene3D Tetratricopeptide repeat domain 785 887 IPR011990 GO:0005515
Apr8g0260 888 SUPERFAMILY POZ domain 183 277 IPR011333 -
Apr8g0260 888 PANTHER ETO1-LIKE PROTEIN 1 1 888 - -
Apr8g0260 888 ProSiteProfiles TPR repeat profile. 711 744 IPR019734 GO:0005515
Apr8g0260 888 SUPERFAMILY TPR-like 383 741 IPR011990 GO:0005515
Apr8g0260 888 Gene3D Tetratricopeptide repeat domain 599 774 IPR011990 GO:0005515
Apr8g0260 888 SMART tpr_5 511 544 IPR019734 GO:0005515
Apr8g0260 888 SMART tpr_5 711 744 IPR019734 GO:0005515
Apr8g0260 888 SMART tpr_5 637 670 IPR019734 GO:0005515
Apr8g0260 888 SMART tpr_5 382 415 IPR019734 GO:0005515
Apr8g0260 888 SMART tpr_5 840 873 IPR019734 GO:0005515
Apr8g0260 888 SMART BTB_4 181 281 IPR000210 GO:0005515
Apr8g0260 888 Gene3D Potassium Channel Kv1.1; Chain A 179 321 IPR011333 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g0260 Apr-Chr8 2089997 2094907 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g0260 712 875 Glycosyltransferase AT3G04240 27.011 7.73e-06 47.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g0260 - - gmx:100785039 1564.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g1039 4 8590851 8598422 Apr8g0260 8 2089997 2094907 PCT