Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g1039 ATGGTTTGTCTCCAGGGGAAGGAAAATTCTAATCTCAGCTCAACTCTCTCTCTACCATTCATTCCTTGCATTTTTTCTCAACTAATTCGTGCTGTTGTGGAGATCCGGGACTTGTTTAATCTCTTATGCCCCATGAGGACTTTCTTCCCTGCTGAATCCTGCAAAGAAACGCACCCAAATGCTTTGAATCCTCAGAGTTGGCTTCAAATTGAAAGAGGGAAACTTCCCAAATTGTCATCACAACCCTCTTCTACGTCAATAGAGTCTCTGATCAAGGTCCCTCAGCCACCTATACTTCCATTCTTTAAGCCTATTGATTATGTGGAAGTTTTAGCTCAAATACATGAGGAACTTGAGTCTTGTCCTGCGCAAGAGCGGTCAAATTTGTTTTTGTTACAATACCAGGTCTTTAGGGGCCTTGGGGAAGTTAAACTGATGCGTAGAAGCCTTCAAGCAGCTTGGAAGAGAGCCAACACCATTCATGAGAAAATTATATTTGGGGCATGGTTGAAATATGAGAAGCAGGAGGAAGAGCTAATAGCCGACTTGCTCGCCACTTGTGGTAAATGTGCAAAGGAATTTGGGCCTGTAGATATATCATCTCATCTTCCATTTAATGTAAATGCGAGTTCCCAAGACAGAATGACCGATGAGAACCACATTTCGGAGTATGTTACTTTTGTCATTGGAAATGAGAAGATAATTTGTGATAGACAAAAAATTTCTCAACTTTCGGCACCATTTCATGCAATGCTAAAAGGGTATTTCAGTGAATCATTCTCTGTAACTGTTGATTTGTCTGAAAATAATATCTCTCCTTTAGGTATGAGGGCAGTAAGTTATTTCAGTTTGACTGGAAGTTTAATTGAAGTTCCTCCGGATCTTTTGTTGGAGATATTAGTTTTTGCTAACAAATATTGCTGTGAAAGACTTAAAGATGTTTGTGATAGAAGACTTGCATCCCTAGTTTCCTCCAGAGATGATGCTGTGGAGCTCATGGAATATGCTATTGATGAGAATTCAACTGTTCTTGCTGCTTCTTGTTTACAGGTCCTTTTGCGTGATCTTCCAAACTGTTTGAATGACGATCGTGTGGTGGAGATATTTATTCATGCTGATAGGCAACAGCTGGCAGTCATGGTTGGGCCAGCTATATTTGCCCTTTTCTGTTTCTTAAGTGAAGTTTCTGTGAACCTTAATTCTAGTTCAGATACAACAGCTCTTATCCTGGAACGGTTAGTTGAGTTTGCTGAGAATGACAAGCAGAGATTGCTGGCTTTACATCAATTGGGATGTGTACGACTCTCAAGGAAAGAATATGATGAAGCACGTATTCTTTTTGAAGGGGCAGTAAATGTAGGCCATATTTATTCTGTTGCAGGTTTAGCTAGACTGGACTATATAAAGGGTGAGAAGCATTTATCTTACGAGAAGCTCAGCTCAGTCATTTCATCTGTTACTCCTCTTGGATGGATGTATCAGGAAAGAGCGCTATATTGTGACAGTGATATAAGGTGGGAGAACCTTAAGAAAGCAAGTGATCTGGACCCTACTCTTACATATCCTTACATGTACAGGGCCACCTGTTTAATGAGGACACAGAATGCTCAAGCTGCACTGGCAGAAATCAATCGGATTCTTGGGTTCAAACTTTCGTTAGAATGCCTGGAAATACGATTTTTTATCCATCTGGCTCTTGAGGACTACAAAGCAGCTCTATGTGATGTTCAAACTATTCTTACTTTACGTTCAGATTATAGAATGTTTGAGGGGCGTGTTGCTGCATCGCAACTGTGTACTCTTGTGCGTGAACATGTTGAACATTGGACAACTGCAGATTGTTGGGCACGGTTATATGACTGTTGGTCTGCAGTTGATGATATTGGGTCTCTATCTGTTATTTACCAGATGCTTGAATCTGATGCGGCAAAAGGTGTTCTATACTTCAGACAATCATTACTTCTCCTGAGGCTGAGCTGTCCTGAGGCAGCTATGCGGAGTTTACAATTAGCTCGGCACCATGCATCAAGTGAGCATGAACGACTTGTATATGAGGGGTGGATCTTATATGATACAGGTCATTATGAGGAAGGGCTCCGTAAAGCTGAAGAGTCTATCAGTATCAAAAGATCTTTTGAGGCCTTTTTTTTGAAGGCCTATGCATTGGCTGACTCTAGTCTAGATCCTTCTTGTTCGTCAACTGTTATTTCACTTCTAGAAGATGCCTTGAAGTGTCCTTCAGATAATCTGCGCAAAGGTCAGGCACTTAACAATCTTGGAAGTGTTTATGTTGACTGTGGTAAATTGGACTTGGCTGCTGATTGTTATATCAATGCCCTTAAAATCCGACACACCCGAGCTCATCAGGGTCTTGCTCGTGTTCATTGTCTCAAGAATGATAAGGCTGCTGCTTATATGGAAATGACTGAACTAATTGAGAAGGCAAAAAACAATGCATCTGCCTACGAGAAGAGGTCTGAGTATTGTGATCGTGAACAAGCAATGGCAGATCTGGAGATGGCAACTAGGTTAGATCCACTTCGGGTGTATCCTTACAGATATCGTGCTGCAGTGTTGATGGACGACCGTAAGGAAGAGGAAGCCATCGCGGAACTCTCTAGAGCCATTGCATTTAAAGCTGATTTGCATCTCTTACATCTACGTGCAGCATTCCATGAACATAAAGAGGATGTCTTAGGTGCTCTAAGAGACTGTCGTGCTGCCCTCTCCGTCGACCCGAACCACCGAGAAATGTTAGAACTTCACAGTCGAGTCAATAGCCATGAGCCATGA 2793 0.4182 MVCLQGKENSNLSSTLSLPFIPCIFSQLIRAVVEIRDLFNLLCPMRTFFPAESCKETHPNALNPQSWLQIERGKLPKLSSQPSSTSIESLIKVPQPPILPFFKPIDYVEVLAQIHEELESCPAQERSNLFLLQYQVFRGLGEVKLMRRSLQAAWKRANTIHEKIIFGAWLKYEKQEEELIADLLATCGKCAKEFGPVDISSHLPFNVNASSQDRMTDENHISEYVTFVIGNEKIICDRQKISQLSAPFHAMLKGYFSESFSVTVDLSENNISPLGMRAVSYFSLTGSLIEVPPDLLLEILVFANKYCCERLKDVCDRRLASLVSSRDDAVELMEYAIDENSTVLAASCLQVLLRDLPNCLNDDRVVEIFIHADRQQLAVMVGPAIFALFCFLSEVSVNLNSSSDTTALILERLVEFAENDKQRLLALHQLGCVRLSRKEYDEARILFEGAVNVGHIYSVAGLARLDYIKGEKHLSYEKLSSVISSVTPLGWMYQERALYCDSDIRWENLKKASDLDPTLTYPYMYRATCLMRTQNAQAALAEINRILGFKLSLECLEIRFFIHLALEDYKAALCDVQTILTLRSDYRMFEGRVAASQLCTLVREHVEHWTTADCWARLYDCWSAVDDIGSLSVIYQMLESDAAKGVLYFRQSLLLLRLSCPEAAMRSLQLARHHASSEHERLVYEGWILYDTGHYEEGLRKAEESISIKRSFEAFFLKAYALADSSLDPSCSSTVISLLEDALKCPSDNLRKGQALNNLGSVYVDCGKLDLAADCYINALKIRHTRAHQGLARVHCLKNDKAAAYMEMTELIEKAKNNASAYEKRSEYCDREQAMADLEMATRLDPLRVYPYRYRAAVLMDDRKEEEAIAELSRAIAFKADLHLLHLRAAFHEHKEDVLGALRDCRAALSVDPNHREMLELHSRVNSHEP* 931
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g1039 930 Coils Coil 805 825 - -
Apr4g1039 930 SUPERFAMILY TPR-like 736 921 IPR011990 GO:0005515
Apr4g1039 930 Gene3D Tetratricopeptide repeat domain 827 928 IPR011990 GO:0005515
Apr4g1039 930 Gene3D Potassium Channel Kv1.1; Chain A 214 364 IPR011333 -
Apr4g1039 930 PANTHER ETO1-LIKE PROTEIN 1 45 930 - -
Apr4g1039 930 SUPERFAMILY TPR-like 425 782 IPR011990 GO:0005515
Apr4g1039 930 SUPERFAMILY POZ domain 225 319 IPR011333 -
Apr4g1039 930 Gene3D Tetratricopeptide repeat domain 405 590 IPR011990 GO:0005515
Apr4g1039 930 PANTHER ETO1-RELATED 45 930 IPR044631 GO:0010105
Apr4g1039 930 ProSiteProfiles TPR repeat profile. 753 786 IPR019734 GO:0005515
Apr4g1039 930 SMART BTB_4 223 323 IPR000210 GO:0005515
Apr4g1039 930 Gene3D Tetratricopeptide repeat domain 642 825 IPR011990 GO:0005515
Apr4g1039 930 SMART tpr_5 882 915 IPR019734 GO:0005515
Apr4g1039 930 SMART tpr_5 424 457 IPR019734 GO:0005515
Apr4g1039 930 SMART tpr_5 753 786 IPR019734 GO:0005515
Apr4g1039 930 SMART tpr_5 679 712 IPR019734 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g1039 Apr-Chr4 8590851 8598422 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g1039 - - aprc:113861325 1821.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g1039 4 8590851 8598422 Apr8g0260 8 2089997 2094907 PCT