Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g0254 ATGGCGAAAGTGTCTCATGCGGATCCTAGAAGAATGTATTCATGGTGGTGGGACAGCCACATAAGCCCCAAGAACTCAAAATGGCTCCAGGAAAATCTGACAGATATGGATGCCAAGGTGAAGCAAATGATTAAGCTCATTGAAGAAGATGCAGATTCCTTTGCAAGGAGAGCAGAAATGTATTATAAAAAACGCCCAGAGCTTATGAAATTGGTTGAAGAGTTTTACCGAGCATACCGGGCATTGGCTGAGAGATATGATCATGCAACTGGAGTGATCCGTCAGGCCCATAGGACCATGGCTGAAGCATTTCCTAATCAAATTCCAATGATGCTGACAGATGATTTACCTGCAGTTTCTCTCACGGAGACTGAGCCACGTACTCCAGATATGCACCACCCTTCACGTGTATTTCTTGATCCTGATGAACCACAAAAGGATGCTTCCACTCATTTCCATGCTATCAAAAGAAATGGAGCTTCTACTGAAGAACCTGATTATGCTTTGAACAAAACAGGTTTGAAACAGCTCAGTGATCTCTACATTCCTGGAGATAATGAAAATCATGCAAAGTTAGCAGAAGGGCGTGTTAGAAAGGGGCTCAATTTTCTTGATACACAGGAGGAGAGCAGTGATCTAAACAATGGAAGCCATGATACAAGAACTCAAGTCTTGTCCGAGTCCGATCGTGTGACAAAAGCTGAGACAGAGATTTTGGCATTGAAGAAAGCCATTACTAAATTAGAAGGTGAAAAGGAAGCTGGTTTGCTTCAGTATCAGCAAAGTTTGGAGAGGTTGTCTAATCTTGAATTAGAAGTGTCTCGAGCACAAGATAATTCTCAAATACTTGATGAGAGAGCAAGTAAAGCTGAAGCTGAAGTTCAAGCCTTGAAGGAAGCCCTAATCAAATTACAGTCTGAAAGGGAAGATAGTCTTCTTCAGTACCAGGAATGCTTGGAGAAAATATCTAATCTGGAGAAAAATATTTCTTTTGCTCAAAAGGATGCAGGGCAACTTAATGAACGAGCTACTAGAGCTGAAACTGAAGCTGATTCCTTAAAGCAGGACCTTGCTAGAGTAGAAGCTGAAAAGGAAGCTGCCCTCGTTCAATATAGACAGTGCTTGGAGACATTATCAAAACTTGAGGAGAGGCTAGAAGAAGCCGAGGAGAATGCAAGAAGGATTAAGGAGCAGGCTAATATAGCTGAAAATGAAATTGAGGCGTTGAAACTAGAAGTTACTAAACTTAATGAAGAGAAGGAAGATGCTGCTCTCCGTTATCAGCAATGTTTGGAGATAATTTCTAGTTTGGAGCATAAACTCTTTTGTGCTGAAGAGGAGGTGAGAAGGCTAAATTCCAAGATAAATGACAAGGTTGAAAAGTTACAGAGTTCCGAACAGAAGTGTCTTCTCTTGGAGACATCAAATCACACTCTGCAGTCTGAATTGCAGTCTTTGACACAAACGATGGGGTCTCAAAGTGAAGAACTTAGTGAGAAGCAGAAAGAATTGAGTGGACTTTGGGGTTGCATACAAGAAGAGAGATTGCGATTCATTGAGGCCGAAACTGCTTTCCAAACTCTTCAGCATTTGCATTCTCAGTCTCAGGAAGAGCTTAGATCTCTTGCTGCTGAACTTCACAGTAAAGTGGAAATACTGGGGAATGTGGAATCACATAAGCAGGCTTTAGAGGACGAAGTACACAGGGTCAATGAGGAAAACAAGATTCTAAATGAGGTCAAAATTTCTTCATCATTGTCTATAAAAAATTTGCAAGATGAGATTTTGAATTTGAGGGAAACAATACAGAAACTTGAACAGGAGGTGGAGCTAAGAATTGATGAAAGAAATGCTCTTCAGCAAGAAATTTACTGTCTTAAAGAGGAGCTTAATGATGTGAATAATAAACATGAAGCCATGATGGAGGAGGTTAGGTCAACTGACTTAGACCCGGAGTGCTTTGTCTCATCTGTGAAAAAATTGCAAGATGAGAACTCAAAGCTGAAGGAAACATGTGAGGCAGACAAAGGTGAGAAAGAAGCTCTTCTGGTAAAATTGGAAACCATGGAGAAACTTTTGGAGAAAAATACAGTTTTAGAGAATTCCCTTTCAGACTTGAATGCTGAGTTGGACAGTGTCAGAGGAAAGGTAAGTGAGTTGGAAGAAACATGCCAATCTCAGCTTGTTGAGAAATCAACTCTTGCTGCTGAGAAGGCCGCCTTGTTTTCTCAGTTACAAGCCACCACTGAAAAACTGGAAAAGCTTTCAGAAAAGAGCAATCTATTGGAAAATTCACTATTTGATGTCAATGCTGAACTCGAAGGATTAAGGGTGAAGTCCAAGGTATTAGAAGACACATGCCAGTCACTTGAACATGAGAAGTCCAGTATCTTTCAAGAGAAAGAAACCTTAGTTTCACAGTTGAACATCACTCATCAAACATTGAAAGATCTTGAGAAACAACACAGTGATTTGGAATCAAAGCATTTGGAACTAAAAGGAGAAAGGGAGTCTGCACTTAAAAAGGTAGAAGAGTTGCTGCTTTCCCTATATTCTGAAAGGGAAGAGCATTCCAGACTTTTGAAATTGAATGAAGATGAATTGGCTGAGAAGGAATTACGAATTCATATACTACAAGATGATGCAAATTGCCAGAAAAAGGAATATGAGGAGGAACTGGACAGAGCTATACATGCTCAGATTGAAATTTTCATTCTGCAGAAATGTATCCATGATTTGGAGAAAAAGAACTTCTCTCTTCTTGTTGAGAGCCAAAGACTTTTGGAGGCTTCCAAAATATCAGACATAATGATGTCTAAATTGGAGACTGAAAATGTTCAAAAGCAGGATGATGTAAATTCTCTGTCTGAGAAAATTAAAATACTAAGGATTGGGCTGCTTCAAGTGTTGAAGACTCTTGACATTAACAGTGACCATTTCTGTGAAGATAAGATTGAAGAAGACCAGATGCTTCTGAACCATATACATGGAAGACTTCAGGAGAAGCAGAAGTCTTTTGACACAATCTTTGATGACAGCCAGAAAATGGCCATTGAGAATTCAGTTCTGATTGCATTCCTTGGGCAATTGAAACAAAAGGTAAAAAATCTTGTGACAGAAAGAGATAACCTTGATGAGGAGTTCAGGATCCAGTCTAAGCAGTTCTTGGCATTGCAAATAGAGGTTCAAAAGATATTGGAGAAGAATCAAGAGTTGAAGTTGACAATAAGCAAAGGAGAAGAAAGAATGGAAGTAATGGCAACTGAAATAGGCAATCTATGCAAGCAGCTGTCAGTCTTGGAAAATAGTCACAACAAGTTACAAGAAGAAAGTTGCAAGACATTGGAAGAGAAAAAGTCCTTGACAAGAAGATTTCAAGATCTTGGTGAGGAGAAGAGTAACTTGGAAGAAGAAATATGTGTCATGGTCCATGAGACAATTGCTCAATCTAATATTTCTCTGATTTACCAGAATATTATCTTTGAAAAGCTCCTGGAACTTAAAAAGCTAGGTGAAGATCTTGACAAACATTGTTCAGTTAATAATGACCTTGAGGAAAGATTAAAAATAATGGTATGCAAATTAGAAAACGCAGGAAGAGAAAATTCACATCTTAAAGGGTTATTTGTAAAGTCAAATGTTGAACTGCATTTAGTTGAATCTGTCAATGATGAATTGAGTTGTAAGATTAGGAATGAAAGGGAACTGTTGCGTCAAAAGGAAAATGAGCTTTTGGAAGCAGTGGAGATGTTCCGTGCTCTGCACACTGAGAAAACAGAATTGCAAAGAATGGTGGAAGATTTGAAAATTAAGTATGATGATGCCAGGATGATGCTTGAAGAACGGGCTAATCAAATTTTGAAGTTGTCCTCAGACAAGGATCATCAAAATGAAGAGCTCAGATGCCTTTGTGAAGTGAATCAGAAGTTGGAGTCAGAAATGAGACACCTACATCAAGAGCTTGGAGAAACTAAGATGAGGGAAAAGGATCTAAGTTATGAATTACATAAGGGAACAAATGAGATTGAAAAATGGGAAACTCAGGCTTCAACACTCTTTGCTGAACTGCAGATTTCTGTTGTCAATGAAACTTTGTTTGAAGGAAAGGTCTGTGAGTTAGCTGATGCATGTGAGAATCTTGAACGCAGAAATTACTCCAAAGACTTAGAAAGTGAACAGCTGAAAGAAAGAGTTAGCAAGCTGGAAGTTGAAAATGGAAGACTGTGTGATCAATTAGCTTCTTATGTCCCGGCTGTCAGTGCTTTGAATGATTGTATAACATCTCTGGAGGTGCAGACTATTGCACACGCAAAACCTCAAGATTATGAACAATCAAAGGTTAAAAATTCGGTGAATAACCAATATGCTGAAAATAGTCAACAAACAGATGAGGATCAGACTGCTATGTCACCATATGCACTCCATGACTTCCTAGACATGCAGAGAAGGATCAATGCAATTGAAATGGCAGTTAAGCAGTTGAATGGAAGTTTGAAAGCCAACGATGAAGCAAGGCAAGATGGCCCTGTTACCGAGATTGAAGTTCTTCCAAAAGACATCATGCTTGATCAGATGTCTGAATGTTCATCATATGGGATAAGTAGGAGAGAAACTGTTGAAGCTGATGATCAGATGCTTGAATTGTGGGAAACAGCTGATAAGGATTCCACTATTGGCATGCAAGTCGACAAGACGCAGAAGGTGGTAGCTGGAGCAGCTGACAATCATCAAAGAGATGCAACCGTGGAATCCAAAAATAAATATCCTTCATCAGAGTCCTTGGTAGAAAAGGAGCTGAGTGTGGACAAGTTAGAGATATCAAGAAGATTGACACAACCACAAGAACAAGGGAACAAGAGCAAGATTTTAGAAAGACTTGATTCTGATGCACAAAAGTTGACAAACCTTCAGATAACCATTCAAGATTTGATGAAAAGGGTGGAGAACACAGAGAAGAACACAAAGGGAAAAGGTGTTGAGTATGATGAGGTGAAAGGGCAACTTGAATCTGCTCAGGAGACCATGGCAAAGTTAGTTGATGCCAACCGCAAGCTGATGAAGAATGTAGAAGAGGGTACCTTGTCTTCTGTTGGGAAGGCTCCTACAACAGAGTCAGATGGGAGTGGAAGTGCCGGCATAAAGGAAGTTTCAGAACAGGCTCGGAGAGAATCAGAAAAAATAGGACAACTACATTTGGAGGTGCAAAGACTACAGTTTCTGCTGCTGAAACTGGGTGATGGAAAAGAGAGCAAGGAAAAAACAAGAATAATTGATCGAAGTCCAAGAGTTCTTCTGCGAGATTATCTTTATGGTGGGATGAGAAACAACAATCAAAAGAAGAAAAAAGTACCCTTTTGTGCATGTGTGAGACCTCCCACCAAAGGAGATTGA 5391 0.3958 MAKVSHADPRRMYSWWWDSHISPKNSKWLQENLTDMDAKVKQMIKLIEEDADSFARRAEMYYKKRPELMKLVEEFYRAYRALAERYDHATGVIRQAHRTMAEAFPNQIPMMLTDDLPAVSLTETEPRTPDMHHPSRVFLDPDEPQKDASTHFHAIKRNGASTEEPDYALNKTGLKQLSDLYIPGDNENHAKLAEGRVRKGLNFLDTQEESSDLNNGSHDTRTQVLSESDRVTKAETEILALKKAITKLEGEKEAGLLQYQQSLERLSNLELEVSRAQDNSQILDERASKAEAEVQALKEALIKLQSEREDSLLQYQECLEKISNLEKNISFAQKDAGQLNERATRAETEADSLKQDLARVEAEKEAALVQYRQCLETLSKLEERLEEAEENARRIKEQANIAENEIEALKLEVTKLNEEKEDAALRYQQCLEIISSLEHKLFCAEEEVRRLNSKINDKVEKLQSSEQKCLLLETSNHTLQSELQSLTQTMGSQSEELSEKQKELSGLWGCIQEERLRFIEAETAFQTLQHLHSQSQEELRSLAAELHSKVEILGNVESHKQALEDEVHRVNEENKILNEVKISSSLSIKNLQDEILNLRETIQKLEQEVELRIDERNALQQEIYCLKEELNDVNNKHEAMMEEVRSTDLDPECFVSSVKKLQDENSKLKETCEADKGEKEALLVKLETMEKLLEKNTVLENSLSDLNAELDSVRGKVSELEETCQSQLVEKSTLAAEKAALFSQLQATTEKLEKLSEKSNLLENSLFDVNAELEGLRVKSKVLEDTCQSLEHEKSSIFQEKETLVSQLNITHQTLKDLEKQHSDLESKHLELKGERESALKKVEELLLSLYSEREEHSRLLKLNEDELAEKELRIHILQDDANCQKKEYEEELDRAIHAQIEIFILQKCIHDLEKKNFSLLVESQRLLEASKISDIMMSKLETENVQKQDDVNSLSEKIKILRIGLLQVLKTLDINSDHFCEDKIEEDQMLLNHIHGRLQEKQKSFDTIFDDSQKMAIENSVLIAFLGQLKQKVKNLVTERDNLDEEFRIQSKQFLALQIEVQKILEKNQELKLTISKGEERMEVMATEIGNLCKQLSVLENSHNKLQEESCKTLEEKKSLTRRFQDLGEEKSNLEEEICVMVHETIAQSNISLIYQNIIFEKLLELKKLGEDLDKHCSVNNDLEERLKIMVCKLENAGRENSHLKGLFVKSNVELHLVESVNDELSCKIRNERELLRQKENELLEAVEMFRALHTEKTELQRMVEDLKIKYDDARMMLEERANQILKLSSDKDHQNEELRCLCEVNQKLESEMRHLHQELGETKMREKDLSYELHKGTNEIEKWETQASTLFAELQISVVNETLFEGKVCELADACENLERRNYSKDLESEQLKERVSKLEVENGRLCDQLASYVPAVSALNDCITSLEVQTIAHAKPQDYEQSKVKNSVNNQYAENSQQTDEDQTAMSPYALHDFLDMQRRINAIEMAVKQLNGSLKANDEARQDGPVTEIEVLPKDIMLDQMSECSSYGISRRETVEADDQMLELWETADKDSTIGMQVDKTQKVVAGAADNHQRDATVESKNKYPSSESLVEKELSVDKLEISRRLTQPQEQGNKSKILERLDSDAQKLTNLQITIQDLMKRVENTEKNTKGKGVEYDEVKGQLESAQETMAKLVDANRKLMKNVEEGTLSSVGKAPTTESDGSGSAGIKEVSEQARRESEKIGQLHLEVQRLQFLLLKLGDGKESKEKTRIIDRSPRVLLRDYLYGGMRNNNQKKKKVPFCACVRPPTKGD* 1797
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g0254 1796 Coils Coil 854 899 - -
Apr8g0254 1796 MobiDBLite consensus disorder prediction 207 222 - -
Apr8g0254 1796 PANTHER PROTEIN NETWORKED 4A 1 1796 - -
Apr8g0254 1796 SUPERFAMILY Tropomyosin 219 421 - -
Apr8g0254 1796 MobiDBLite consensus disorder prediction 1692 1722 - -
Apr8g0254 1796 Coils Coil 1027 1047 - -
Apr8g0254 1796 Coils Coil 1118 1138 - -
Apr8g0254 1796 Coils Coil 231 251 - -
Apr8g0254 1796 Coils Coil 1062 1082 - -
Apr8g0254 1796 Coils Coil 588 647 - -
Apr8g0254 1796 Coils Coil 553 580 - -
Apr8g0254 1796 Gene3D - 683 862 - -
Apr8g0254 1796 MobiDBLite consensus disorder prediction 207 228 - -
Apr8g0254 1796 MobiDBLite consensus disorder prediction 126 147 - -
Apr8g0254 1796 Coils Coil 1633 1653 - -
Apr8g0254 1796 Coils Coil 1223 1285 - -
Apr8g0254 1796 Coils Coil 434 468 - -
Apr8g0254 1796 Coils Coil 658 678 - -
Apr8g0254 1796 Coils Coil 1377 1411 - -
Apr8g0254 1796 Coils Coil 938 958 - -
Apr8g0254 1796 SUPERFAMILY Tropomyosin 397 647 - -
Apr8g0254 1796 Coils Coil 738 793 - -
Apr8g0254 1796 PANTHER KINASE INTERACTING (KIP1-LIKE) FAMILY PROTEIN 1 1796 - -
Apr8g0254 1796 Coils Coil 1661 1688 - -
Apr8g0254 1796 MobiDBLite consensus disorder prediction 1695 1712 - -
Apr8g0254 1796 MobiDBLite consensus disorder prediction 125 147 - -
Apr8g0254 1796 Coils Coil 1090 1110 - -
Apr8g0254 1796 Coils Coil 259 426 - -
Apr8g0254 1796 Coils Coil 689 723 - -
Apr8g0254 1796 Pfam KIP1-like protein 14 87 IPR011684 GO:0003779
Apr8g0254 1796 ProSiteProfiles Networked (NET) actin-binding (NAB) domain profile. 13 93 IPR011684 GO:0003779
Apr8g0254 1796 Coils Coil 801 835 - -
Apr8g0254 1796 Coils Coil 1167 1201 - -
Apr8g0254 1796 Coils Coil 1293 1327 - -
Apr8g0254 1796 Coils Coil 483 503 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g0254 Apr-Chr8 2019442 2027647 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g0254 - - lang:109335385 2395.16
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr8g0254 8 2019442 2027647 Apr8g0254 8 2019442 2027647 ECH
Apr4g1045 4 8655671 8662242 Apr8g0254 8 2019442 2027647 PCT