Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g1045 ATGGCCGCTCTGTCCCATGCTGATTCTAAAAGAATGTATTCATGGTGGTGGGACAGTCACATAAGCCCCAAGAATTCGAAATGGCTCCAAGAAAATCTGACAGATATGGATACCAAGGTGAAGCAAATGATCAAGCTTATTGAAGAAGATGCAGATTCCTTTGCAAGAAGGGCAGAAATGTACTATAAAAAGCGCCCAGAGCTCATGAAATTAGTTGAAGAGTTTTACCGGGCATACCGGGCATTGGCTGAGAGATATGATCATGCAACTGGAGTGATACGCCAGGCACATCGTACCATGGCTGAAGCATTTCCGAATCAAGTCCCTCTGGTACCATCAGATGATTTACCCGGAGTTTCCTCCATGGATACTGAGCTGCATACACCAGAGACACTTAACCATTCTCGTGCATTTCTTGATTCAGATGAATTGCAAAAGGATGATTCAACTCATTTCCATGCCATTAAACGAAATGCATCTTATACTGATGAAGCTGATTCTACTACAAGCAGAAAGGGTTTGAAACAGCTAAATGATCTATTCATGTCAGGAGAACCTGTAAGTCATACAAAGTTTGCAGAAGGGCGTGCTAGAAGGGGGCTCAATTTTCTTGACACACAGGAGATTAATGGGCAAGAAAATGGAAGCCATGATACTGGGGATCGTGTCTTATCTGAGTCAGAACGGATGACCAAGGCAGAGACAGAAATTTTGGCCTTAAAGAAAGCACTTGCTAAGTTAGAAAGTGAAAAGGAAGCTGGCTTGCTTCAGTATCAGAATAGTTTGGAGAGATTGTCTAATCTGGAATCGGAAATGTCTCGTGCAAGAGAGAATTCAGAAGGACTTAACGAAAGAGCAAACAAAGCTGAAGCTGAAGTTCAAACCTTAAAGGAAGCTCTTACTGAATTACAGGCTGAAAGAGAAGCTAGTCTTCTTCAGTACCAGCAGTGCTTGGAGAAAACATATGATCTGGAGAAAAGTATTTCTTCTGCTCAGAAGGATGCAGGAGAACTTAATGAACGAGCTACTAGGGCTGAAACTGAAGCTGAATCCTTAAAGCGAGACCTTGCTAGAGTAGAAGCTGAAAAGGAAGCTGCCCTTGTTCAATATAAACAGTCCTTAGAGACGTTGTCAAAACTAGAGGAAAGATTAGTACAAGCTGAAGAGAATGCAAGGAGAATTAATGAGCAAGCTAGTATAGCAAAAAATGAAATTGAGGACATGAAGTTAGAAATTGCTAAACTTACTGAAGAGAAGGAAGATGCAGCTCTTCGTTATCAGCAATGCTTGGAGATAATTTCCAGTCTGGAGTATAAACTCTCTTGTGCCAAAGAGGAGGTGCATAAGCTAAATTGCAAGATAAATGATGGGGTTGAACAGTTACATAGTTCTGAACAGAAGTGTCTTATCTTGGAAACATCTAATCAGACTCTGCAATCCGAATTGCAGTCTTTGGCACAGAAATTGGGATCTCAAAGTGAAGAACTTAGTGAGAAGCAGAAGGAATTGGGAAGACTTTGGACTTGCATACAAGAGGAGCGGTTGCGGTTCATTGAGGCTGAAACTGCTTTCCAAACTCTTCAGAATTTGCACTCTCAATCTCAGGAAGAGCTTAGGTCTCTTGCCACTAAGCTTCACAATAAGGCTGAAATTTTGGAGAAAATGGAATCCCATAAGCAGGTTTTAGAGGATGAAGTACACAAGGCCAAGGAGGAAAGCAAAACTCTAAATGAGCTCAAATTATCTTCATCTTTGTCTATAAAAAATTTGCAGGATGAGATATTAAATTTGAGGGAGACAATAAAGAAACTTGAACTGGAGGTTGAATTGCGAGTAGATGAACGAAATGCTCTTCAGCAAGAAATTTACTGTCTTAAAGAGGAGCTTCATGATGTGAATAGAAGACATGAATCCATGATGGAGGAGGTCAGATCAACTGACTTTGATCCACTGTGCTTTGCCTCATCTGTGAAGAAATTGCAAGATGAAAACTTAAAGCTAAAGGAAATAAGTGAATCAGACGAAGATGAGAAAGGAGCTTTAAAGGAAAAACTGGAGATCATGGAGAATATTTTGGAAAAAAATGCTGTTTTGGAGAATTCCCTCTCAGATTTAAATGCTGAACTGGAAAGTGTCCGTGGAAAGGTAAAGGTATTGGAAGAAACTTGTGAAGCTTTGCTTGGGGAGAAATCCTCTCTTGCTTCTGAGAAGGCCACCTTGTTTTCTCAGTTACAAGCCACAGCTGAAAAGCTGGAAAAGCTCTCAGAAAAAAACAACCTTTTAGAAAGTTCACTGTTTGATGTGAATGCTGAGCTTGAAGGATTAAGGGTAAAGTCAAAGATTTTAGAAGACTCTTGTCTGTTGCTTGACCATGAGAAGTCCAGTCTCATGTCTGAGAAAGAAACCTTAGTTTCACAATTGAACGTCACTCATAAAACACTGAAAGATCTTGAGGAGAAACACAGTGACTTGGAACTGAAGCATCTGGAATTGAAAGCAGAAAGGGTGTCCGCACTTCAAAAGTTGGAAGAGCTCCTTGTTTCCTTATATGCTGAGAGGGAAGAACATTCCAGAATTGTGCAATTGAGTGAAAGTCACTTGGCTGAGAAGGAATTACAAATTTATATTCTACAAGAAGATGCAAATTACCAGAAAAATGAATATGAAGTGGAACTGGACAGAGCTGTACATGCTCAAATGGAAATCTTCATCTTGCAGAAATGTATCCAGGATTTGGAGCAAAAGAACTTCTCCCTTCTAGTTGAGTGTCAGAGACTCTTGGAGGCATCCAAAATGTCTGATAAATTGATATCTAAATTGGAGAATGACAATGTTCAAAAGCAAGTTGATGTGAATTCATTGTCTGACAAAATTGAAGTACTAAGGATTGGGCTGCTTCAAGTGTTAAAGACTCTTGACATTAACAGTGAGCATTGGTGTGAAGATTTGATTGAAGAAGACCAGGAGCTTCTGAACCATATACATGGCAAACTTCAGGAGACACAGAATTCTTTTGTCACAATTTTCAATGAAAGCGAGCAAGTGGCCATTGAGAATTCAGTTCTTGTTACATTCCTTGGCCAGTTGAGATTAAAGGCCGAAAATCTTTTGACAGAAAGAAATGCCCTTGATAAGGAGTTGAGGACCCAGTCTAAGCAGTTCTTGGCATTGCAGGTAAAGGTACAAAAGATTCTGGAGAAGAATCAGGAATTGAAGTTGACAATTAGCAAGGGAGAAGAGAAAATGGAAGTGATGACAACTGAAATAGAGAATCTATGCAAACAGCTGTTAGACTTGAAAGAGGATTACGTAAACATAAAAGAAGATAGTGGCAAAACAATTGAAGAGAAAAATACCTTGATGAGAAGACTTCTGGACCTGGGTGAAGAGAAAAGTAGGTTGGAAGAAGAAATCTGCATCATGATTCATGAGACAATAGCTCAATCTAATATTTCTCTGATCTACCAGAACATTGTCTTTGAAAAACTCCTGGCACTTGAGGTGCTAAGCAAAGATCTTGATAGACTTTGTTCAGTAAATAACAACCTTGAGGAGAAATTAAAAATAATGATGGGCAAATTAGAAGATACACAAATGGAAAATTCATATCTTAAAGAGTCATTTGTAGTGTCAAACATTGAACTAAAATTAGTTCAATCCGTCAATGATCAATTAAATTGTCAGATTATGAATGGAAAGGAATTGTTGTCTCAAAAGGAAAATGAGATTTTGGAAGCAGCAGAAATGTTTAGTGCTTTAAATGATGAGAAAACAGAATTGCAAAGATTGGTGGAAGATCTGAAGAGCAAGTATGATGAGGCCAAGGAGATACTTGAAGACCAAGCTAGTCAAATTTTAAAATTATCCTCAGACAAGGATCGTCAAAATGAAGAGCTTGGATGCCTTTGTGAAGTGAATCAGAAGTTAGAGGCTAAAATGAGGCACCTGCATCAAGAACTTGGAGAAACTAAACTGAGGGAAGAGAAGCTTAGTTATGAACTACTTAAGGGAACAAATGAGATCGAACAGTGGGAAACCAAGGCAGCCACACTCTATACCAGACTGCAGATTTCTGCTGTCAATGAGACATTATTTGAGGGGAAGGTTCATGAGCTAGCTAATGCATGTCAGAATCTCGAACGCAGAAGCAACTTTGAAGGCATGGAAAGTGAAATGCTGAAAGAAAGGGTTAACAGGTTGGAAGGTGAAAACGGGAGACTACATGGTCAGTTGGCTGCTTATGTCCCAGCTGTTAGTGCTTTGAATGATTGTATAACATCCTTGGAGATGCAGACGCTTGTACAAGCAAAACCTCATGACTTCAAAGTATCTAAGGTTAAAGATTTGGCAAATCAGAACTACACTGAAGATGATCAACAAACTGTTGAAGATCAGAATGCTACCACAACAGATGCTCTTCCGGACTTCCAAGACATGCAGAACAGGATCAATACAATTGAAATGGTTGTTAAAAAGATGAATGAAAGTTTCAAACCTAAGGATGAAATGAGAGAGATTCAAATGTTAAAATCTGGAATCAGGTGGCGTCAAGGAAATATCCAAGCAAATATCCTTGTAGCAGAAATTGAAGTTCTGCCAAAAGACATCATGCTTGATCAAACGATTGAATGTTCATCATACGGGGTGAATAGGAGAGGAAGTCTTGAGTCTGATGATCAGATGCTTGAATTGTGGGAAACTGCTAACAAGGATGGCGCTATTGGTCTGACAGTTGGCAAGGCACCAAAGACAGCCACTGCACCTACTGGATACCATCAAAAGAGAGTGACCAAGGAACCCAAAAACAAATATCCTTCAGTAGAGTCCTTGATTGAGAAGGAGTTGAGTGTGGACAAATTAGAGATCTCAAGAAGATTGACACAGCCACATCGACATCCACATGAAGATGGCAACAAGAGGAAGATTTTAGAAAGACTTGATTCTGATGCTCAAAAGTTGACAAACCTTGAAATTACTGTACAAGATTTGATGAGCAAGATGGAAATTACTGAGGAGAGCACAAAGGGAAAAGGTATTGAGTATGATACTGTGAAAGAGCAGCTTGAAGCTGCCCAAGAATCCATCACAAAGTTGTTTGATGCCAACCGAAAGTTGAAGAAGAATGTAGAAGAGGGTACCTCATCCTTTGCTGGGAAGTCTGCAACAGAATCAGATGAGAGTGGAAGCATAAGCAGAAGGAGAGTTTCAGAACAGGCTCGGAGAGGGTCTGAAAAAATAGGACGGCTGCAGTTGGAGGTGCAAAGACTGCAATTTTTACTTCTAAAGTTGAATGATGAAAAAGAAAGCAAAGGAAAAGCATTGATTGATGATCGAAATCCAAGGGTCCTTTTGAGAGATTATCTCTATGGTGGGACAAGAAGAAACTACCACCAGAAGAGGAAGAAGAAAGCACCCTTTTGTGCATGCATGCAACCTCCTACTAAAGGAGATTAA 5454 0.3968 MAALSHADSKRMYSWWWDSHISPKNSKWLQENLTDMDTKVKQMIKLIEEDADSFARRAEMYYKKRPELMKLVEEFYRAYRALAERYDHATGVIRQAHRTMAEAFPNQVPLVPSDDLPGVSSMDTELHTPETLNHSRAFLDSDELQKDDSTHFHAIKRNASYTDEADSTTSRKGLKQLNDLFMSGEPVSHTKFAEGRARRGLNFLDTQEINGQENGSHDTGDRVLSESERMTKAETEILALKKALAKLESEKEAGLLQYQNSLERLSNLESEMSRARENSEGLNERANKAEAEVQTLKEALTELQAEREASLLQYQQCLEKTYDLEKSISSAQKDAGELNERATRAETEAESLKRDLARVEAEKEAALVQYKQSLETLSKLEERLVQAEENARRINEQASIAKNEIEDMKLEIAKLTEEKEDAALRYQQCLEIISSLEYKLSCAKEEVHKLNCKINDGVEQLHSSEQKCLILETSNQTLQSELQSLAQKLGSQSEELSEKQKELGRLWTCIQEERLRFIEAETAFQTLQNLHSQSQEELRSLATKLHNKAEILEKMESHKQVLEDEVHKAKEESKTLNELKLSSSLSIKNLQDEILNLRETIKKLELEVELRVDERNALQQEIYCLKEELHDVNRRHESMMEEVRSTDFDPLCFASSVKKLQDENLKLKEISESDEDEKGALKEKLEIMENILEKNAVLENSLSDLNAELESVRGKVKVLEETCEALLGEKSSLASEKATLFSQLQATAEKLEKLSEKNNLLESSLFDVNAELEGLRVKSKILEDSCLLLDHEKSSLMSEKETLVSQLNVTHKTLKDLEEKHSDLELKHLELKAERVSALQKLEELLVSLYAEREEHSRIVQLSESHLAEKELQIYILQEDANYQKNEYEVELDRAVHAQMEIFILQKCIQDLEQKNFSLLVECQRLLEASKMSDKLISKLENDNVQKQVDVNSLSDKIEVLRIGLLQVLKTLDINSEHWCEDLIEEDQELLNHIHGKLQETQNSFVTIFNESEQVAIENSVLVTFLGQLRLKAENLLTERNALDKELRTQSKQFLALQVKVQKILEKNQELKLTISKGEEKMEVMTTEIENLCKQLLDLKEDYVNIKEDSGKTIEEKNTLMRRLLDLGEEKSRLEEEICIMIHETIAQSNISLIYQNIVFEKLLALEVLSKDLDRLCSVNNNLEEKLKIMMGKLEDTQMENSYLKESFVVSNIELKLVQSVNDQLNCQIMNGKELLSQKENEILEAAEMFSALNDEKTELQRLVEDLKSKYDEAKEILEDQASQILKLSSDKDRQNEELGCLCEVNQKLEAKMRHLHQELGETKLREEKLSYELLKGTNEIEQWETKAATLYTRLQISAVNETLFEGKVHELANACQNLERRSNFEGMESEMLKERVNRLEGENGRLHGQLAAYVPAVSALNDCITSLEMQTLVQAKPHDFKVSKVKDLANQNYTEDDQQTVEDQNATTTDALPDFQDMQNRINTIEMVVKKMNESFKPKDEMREIQMLKSGIRWRQGNIQANILVAEIEVLPKDIMLDQTIECSSYGVNRRGSLESDDQMLELWETANKDGAIGLTVGKAPKTATAPTGYHQKRVTKEPKNKYPSVESLIEKELSVDKLEISRRLTQPHRHPHEDGNKRKILERLDSDAQKLTNLEITVQDLMSKMEITEESTKGKGIEYDTVKEQLEAAQESITKLFDANRKLKKNVEEGTSSFAGKSATESDESGSISRRRVSEQARRGSEKIGRLQLEVQRLQFLLLKLNDEKESKGKALIDDRNPRVLLRDYLYGGTRRNYHQKRKKKAPFCACMQPPTKGD* 1818
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g1045 1817 Coils Coil 1746 1766 - -
Apr4g1045 1817 Coils Coil 1026 1053 - -
Apr4g1045 1817 Coils Coil 475 502 - -
Apr4g1045 1817 ProSiteProfiles Networked (NET) actin-binding (NAB) domain profile. 13 93 IPR011684 GO:0003779
Apr4g1045 1817 Coils Coil 1681 1708 - -
Apr4g1045 1817 Coils Coil 657 677 - -
Apr4g1045 1817 Coils Coil 328 425 - -
Apr4g1045 1817 SUPERFAMILY Tropomyosin 406 645 - -
Apr4g1045 1817 Coils Coil 433 453 - -
Apr4g1045 1817 Coils Coil 1117 1137 - -
Apr4g1045 1817 MobiDBLite consensus disorder prediction 1726 1744 - -
Apr4g1045 1817 PANTHER KINASE INTERACTING (KIP1-LIKE) FAMILY PROTEIN 1 1817 - -
Apr4g1045 1817 Coils Coil 587 635 - -
Apr4g1045 1817 Coils Coil 909 929 - -
Apr4g1045 1817 Coils Coil 800 834 - -
Apr4g1045 1817 Coils Coil 1166 1200 - -
Apr4g1045 1817 MobiDBLite consensus disorder prediction 1625 1644 - -
Apr4g1045 1817 Coils Coil 230 250 - -
Apr4g1045 1817 Coils Coil 681 729 - -
Apr4g1045 1817 PANTHER PROTEIN NETWORKED 4A 1 1817 - -
Apr4g1045 1817 Coils Coil 839 859 - -
Apr4g1045 1817 Coils Coil 1306 1326 - -
Apr4g1045 1817 Coils Coil 737 771 - -
Apr4g1045 1817 MobiDBLite consensus disorder prediction 1711 1744 - -
Apr4g1045 1817 Pfam KIP1-like protein 14 87 IPR011684 GO:0003779
Apr4g1045 1817 Coils Coil 258 313 - -
Apr4g1045 1817 Coils Coil 1061 1109 - -
Apr4g1045 1817 Coils Coil 937 957 - -
Apr4g1045 1817 Coils Coil 545 579 - -
Apr4g1045 1817 Coils Coil 1653 1673 - -
Apr4g1045 1817 Coils Coil 1222 1298 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g1045 Apr-Chr4 8655671 8662242 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g1045 - - gmx:100810726 2850.08
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g1045 4 8655671 8662242 Apr4g1045 4 8655671 8662242 ECH
Apr4g1045 4 8655671 8662242 Apr8g0254 8 2019442 2027647 PCT