Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g0251 ATGAGAGATGAGAACTCGAAGAAAAGCAAGCTTTCATGGCCCAAAACGTTGGTCAAGAAGTGGTTCAATATCAAGAGCAAAGCTGAGGACTTTCAGGCAGATGATGTCCTTTACGGAGGTGTCGATGAAGAGTGGAGGAGCAACTGTTCACAGAGGGAGGAATGCACTATCAAGAAAAGCAAAACAGATAGAGCAAAGAGAAGGAACTCAGATAGAATGCGGCGAGGTAAGATTGACCCTGATGCAGCTCAGGTTACGGATGTGTATAACTATAGAATCTTTGTTGCCACTTGGAATGTAGCTGGAAAATCTCCTCCAAGTTATTTGAGTCTGGAAGATTGGCTTCACACTTCTCCACCTTCTGATATCTATGTTCTTGGGTTTCAAGAAATTGTACCTCTCAATGCTGGAAATGTTTTAGGTACAGAAGACAATGGTCCTGCCAGAAAATGGCTAGCTCTTATTAGGAAGACCCTAAACAGTCTTCCTGGAACAAGTGGTGAATGCCACACTACATCGCCGCTTCCTGATCCTATTGTAGAGTTAGATGCTGATTTTGAGGGATCAATGAGGCAGAAGGAAACCTCTTTTTTCCATCGCAGGTCTTTCCAATCCTTGAGTCGTAGTATGAGAATGGACAATGACATGTCACTGCCACAAGCTTACCTTGACCGCCGTCTCAGCGTGTGTGATCGAATGATGTTTGGCCACAGGACAAGTGACTATGATCCCAATTATAGATGGGCTTCCTCAGATGATGAAAACGGGCCTGGTGACTCCCCAGTTGCGACACAATATTCACCAATGTCATATAGAGGTTTTTTCTCTATGGATGACAGAGAGAGACACACAGGGCACTCAAGATACTGTTTGGTTGCTAGTAAGCAAATGGTTGGGATATTTCTTACAGTTTGGGTGAAAAGTGATATAAGAGATGATGTTCACAACATGAAAGTTTCTTGTGTTGGCAGAGGATTGATGGGATATCTTGGAAACAAGGGTTCAATCTCAATTAGCATGTCTTTGCACCAAACAAGCTTTTGCTTCATATGTAGTCATTTGACTTCTGGACAAAAGGAGGGTGATGAGCTAAGGAGGAATTCAGATGTAATGGAGATACTCAGAAAGACAAGGTTTCCCCGGGTTCACGGCATGGGCAATGAGAGATCTCCTCAGACGATTCTAGAACACGATCGAATAATTTGGCTGGGGGATTTAAATTATCGGATAGCCCTTTCTTACCGTGCAGCAAAAGCTCTTGTTGAGATGCGTAATTGGAAGGTTTTGTTAGAGAATGACCAGCTTCATATAGAGCGGAGACAAGGCCGTGTCTTTGAAGGATGGAATGAGGGGAAAATATATTTCCCTCCAACATACAAGTATTCGAACAATTCAGACAGATATGCAGGAGATGAAAGACACTCAAAACAAAAGAGAAGAACTCCAGCATGGTGTGATCGAATCTTGTGGTATGGAAGAGGCCTCCGTCAATTATCTTATGTACGAGGGGAATCAAGATTCTCTGATCATAGACCAGTTTATAGTATGTTCCAGGCAGAAGTTGAGTCTCTTAGCCGTAACCGAATCAAAAAATGCTCTAGTTGCTCCAGTTCAAGAATTGAAGTAGAAGAGCTGTTGCCACATTCACATGGTTACAGCTACACTGATTTGAATATCTTTTGA 1683 0.4272 MRDENSKKSKLSWPKTLVKKWFNIKSKAEDFQADDVLYGGVDEEWRSNCSQREECTIKKSKTDRAKRRNSDRMRRGKIDPDAAQVTDVYNYRIFVATWNVAGKSPPSYLSLEDWLHTSPPSDIYVLGFQEIVPLNAGNVLGTEDNGPARKWLALIRKTLNSLPGTSGECHTTSPLPDPIVELDADFEGSMRQKETSFFHRRSFQSLSRSMRMDNDMSLPQAYLDRRLSVCDRMMFGHRTSDYDPNYRWASSDDENGPGDSPVATQYSPMSYRGFFSMDDRERHTGHSRYCLVASKQMVGIFLTVWVKSDIRDDVHNMKVSCVGRGLMGYLGNKGSISISMSLHQTSFCFICSHLTSGQKEGDELRRNSDVMEILRKTRFPRVHGMGNERSPQTILEHDRIIWLGDLNYRIALSYRAAKALVEMRNWKVLLENDQLHIERRQGRVFEGWNEGKIYFPPTYKYSNNSDRYAGDERHSKQKRRTPAWCDRILWYGRGLRQLSYVRGESRFSDHRPVYSMFQAEVESLSRNRIKKCSSCSSSRIEVEELLPHSHGYSYTDLNIF* 561
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g0251 560 Gene3D Endonuclease/exonuclease/phosphatase 70 183 IPR036691 -
Apr8g0251 560 Gene3D Endonuclease/exonuclease/phosphatase 258 545 IPR036691 -
Apr8g0251 560 PANTHER PHOSPHORIC MONOESTER HYDROLASE-RELATED 3 555 - -
Apr8g0251 560 SUPERFAMILY DNase I-like 78 533 IPR036691 -
Apr8g0251 560 PANTHER TYPE IV INOSITOL POLYPHOSPHATE 5-PHOSPHATASE 9 3 555 IPR045849 GO:0004445|GO:0046855
Apr8g0251 560 Pfam Endonuclease/Exonuclease/phosphatase family 96 510 IPR005135 GO:0003824
Apr8g0251 560 SMART i5p_5 225 525 IPR000300 GO:0016791|GO:0046856
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g0251 Apr-Chr8 1986048 1990848 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g0251 292 527 Acyl Lipid Metabolism Gene Families AT2G43900 29.242 1.68e-30 125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g0251 - - gmx:100797409 1063.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr8g0251 8 1986048 1990848 Apr8g0251 8 1986048 1990848 ECH
Apr4g1047 4 8689804 8692905 Apr8g0251 8 1986048 1990848 PCT