Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g1047 ATGAGAGATGAGAATTCGAAGAAAGGCAAGCTTTCTTGGCCAAAAACATTGGTCAAGAAGTGGTTCAATATCAAGAGCAAAGCTGAGGACTTTCAGGCAGATGAGGTTCCCTGCGAAGGTGTTGATGAAGAGTGTAGGAGCAAATACTCAGAGAGGGAGGCATGCACTATCAAGAAAAGCAAAACAGAGAGATCAAGCAGAAGGTACTCAGACAGAATGCGAAGAGGTAAGAATGACCTTGATGAAGCTCAGGTTACAGATGTGTATAATTATAGAATCTTTGTTGCCACTTGGAATGTAGCAGGGAAGTCACCTCCAAGTTATTTGAGTCTTGAAGATTGGCTTCATGCCTCTCCACCTGCTGATATCTATATTCTTGGGTTTCAAGAAATTGTACCTCTTAATGCTGGTAATGTTTTGGGAACAGAAGATAATGGACCTGCGAGAAAATGGCTGGCTCTGATAAGGAGGACCCTGAACAGCCTTCCTGGAACAAGTGGTGGATGCCACACTCCTTCACCACTCCCTGATCCTATTGTAGAGCTAAATGCTGATTTTGAGGGATCAATGAGGCAGAAGGCAACCTCTTTCTTTCAACGGAGGTCCTTCCAATCCTTGAGTCGTAGTATGAGAATGGATAATGACATGTTAATGCCTCAAACTTGCCTTGATCGCCGTCTCAGTGTCTGTGACAGAATGATATTGGGTCACAGGACGAGTGACTATGACCCCAATTATCGATGGGGTTCATCAGATGATGAAAATGGCACTGGTGACTCCCCAATTGCAACACAGTATTCACCAGTGTCATATGGCGGTTGTTTCTCTATGGAGGACAGTGATAGACCAACAGGGCACTCAAGATACTGTTTGGTTGCTAGTAAGCAAATGGTTGGGGTATTTCTGACTGTTTGGGTGAAAAGTGATATCAGAGATGATGTTCACAACATGAAAGTGTCTTGTGTTGGTAGAGGGTTGATGGGATATCTTGGAAACAAGGTACATTTGGCAATTTATTTTAATAGCAAAGTTTGTAGTGAACTAGGGAAGGAAACAATTTCATTCTCTTGGACTTTCCAGGGATCAATATCAATTAGTATGTCATTGCACCAAACAAGCTTTTGCTTCGTCTGTAGTCATTTGACTTCTGGACAAAAGGATGGTGATGAGCTAAGGAGGAATTCAGATGTAATGGAGATTCTCAGAAAGACAAGGTTTCCTCAGGTCCATGACATGGGTGATGAGAATTCTCCTCAGACAATTCTGGAACATGATCGAATAATTTGGCTGGGGGATTTAAATTATCGGATAGCCCTTTCTTACCGTGCAGCAAAAGCTCTTGTTGAGATGCATGATTGGAAGACTTTATTAGAGAATGACCAGCTGTGTGTAGAGCAGAGGCAAGGTCGAGTCTTTGAAGGATGGAATGAAGGGAAAATATATTTCCCTCCCACGTATAAGTATTCAAACAATTCAGACAGATATGCAGGTGATGACAGACGCTCAAAACAAAAGAGAAGAACTCCAGCATGGTGTGATCGCATCCTGTGGTATGGAAGAGGCCTTCACCAATTATCTTATGTTCGTGGGGAGTCAAGATTCTCTGATCATAGGCCAGTTTATAGTATATTCTTGGCAGAAGTTGAGTCTATAAGCTGTAACCAAATAAAGAAAAGCTCCAGTTCAAGGATTGAAGTAGAAGAGTTATTGCCACATTCACATGGTTATAGCTACACCGATTTGAACTTATTTTGA 1755 0.4205 MRDENSKKGKLSWPKTLVKKWFNIKSKAEDFQADEVPCEGVDEECRSKYSEREACTIKKSKTERSSRRYSDRMRRGKNDLDEAQVTDVYNYRIFVATWNVAGKSPPSYLSLEDWLHASPPADIYILGFQEIVPLNAGNVLGTEDNGPARKWLALIRRTLNSLPGTSGGCHTPSPLPDPIVELNADFEGSMRQKATSFFQRRSFQSLSRSMRMDNDMLMPQTCLDRRLSVCDRMILGHRTSDYDPNYRWGSSDDENGTGDSPIATQYSPVSYGGCFSMEDSDRPTGHSRYCLVASKQMVGVFLTVWVKSDIRDDVHNMKVSCVGRGLMGYLGNKVHLAIYFNSKVCSELGKETISFSWTFQGSISISMSLHQTSFCFVCSHLTSGQKDGDELRRNSDVMEILRKTRFPQVHDMGDENSPQTILEHDRIIWLGDLNYRIALSYRAAKALVEMHDWKTLLENDQLCVEQRQGRVFEGWNEGKIYFPPTYKYSNNSDRYAGDDRRSKQKRRTPAWCDRILWYGRGLHQLSYVRGESRFSDHRPVYSIFLAEVESISCNQIKKSSSSRIEVEELLPHSHGYSYTDLNLF* 585
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g1047 584 PANTHER TYPE IV INOSITOL POLYPHOSPHATE 5-PHOSPHATASE 9 3 341 IPR045849 GO:0004445|GO:0046855
Apr4g1047 584 PANTHER TYPE IV INOSITOL POLYPHOSPHATE 5-PHOSPHATASE 9 358 580 IPR045849 GO:0004445|GO:0046855
Apr4g1047 584 PANTHER PHOSPHORIC MONOESTER HYDROLASE-RELATED 3 341 - -
Apr4g1047 584 PANTHER PHOSPHORIC MONOESTER HYDROLASE-RELATED 358 580 - -
Apr4g1047 584 SUPERFAMILY DNase I-like 81 558 IPR036691 -
Apr4g1047 584 Pfam Endonuclease/Exonuclease/phosphatase family 96 537 IPR005135 GO:0003824
Apr4g1047 584 SMART i5p_5 225 552 IPR000300 GO:0016791|GO:0046856
Apr4g1047 584 Gene3D Endonuclease/exonuclease/phosphatase 264 570 IPR036691 -
Apr4g1047 584 Gene3D Endonuclease/exonuclease/phosphatase 71 211 IPR036691 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g1047 Apr-Chr4 8689804 8692905 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g1047 292 517 Acyl Lipid Metabolism Gene Families AT2G43900 27.600 3.78e-24 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g1047 - - gmx:100803074 1026.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g1047 4 8689804 8692905 Apr4g1047 4 8689804 8692905 ECH
Apr4g1047 4 8689804 8692905 Apr8g0251 8 1986048 1990848 PCT