Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g0232 ATGGAGCTCAGTAAAGTCACCCTGGAGATCTTCTCCAAACTCGAACACAAATGGCTATCTCACTGTAAAGTCACCAACAAGACCCGCATTCTCAGCATTGACGGCGGAGGAACCACCGCCATTGTCGCCGGCGTTGCTCTCATTCACCTCGAGGATCAGATCCGTCTCCACACCTCCGATCCCCACGCTCACATTGCCGATTTCTTCGACATTGTCGCCGGCACAGGCATTGGTGCCATTCTTGCCGCCATGATCACCGCCGGCGATGCCTTCGGCAGGCCCCTCTACACTGCCAGAGAAGCCGTTCGTCTCGTTTCCGAGAGGAACTCCGAACTCTACAAGCTCAAATCTGCCGGAGTCTTTCGCCGGCGCCGGAGATTCTCTTCTAGGAGCATGGATAACGTGTTGAAGCAAGTGTTCCAGAGGAAGGAAGACGGACGGTTGTTGACCTTGAAGGACACGTGTAAACCGCTTCTTATCCCTTGCTTTGACCTCAAGAGTTCGGCGCCGTTCGTCTTTTCTCGAGCCGATGCGTCCGAATCTCCCAGCTTCAACTTCGAGCTCTGGAAGGTATGCCGCGCCACCTCGGCCACGCCGAGCCATTTCAAGCCGTTCCAATTCGCTTCCGTCGACGGCAAGACCTCCTGCTCAGCCGTAGACGGCGGCCTGGTGATGAACAATCCTACGGCGGCGGCCGTCACACACGTCCTCCACAACAAGCGAGATTTTCCGTCGGTGAACAGCGTGGAGGATCTTTTGGTCCTTTCCTTGGGTAACGGATCGTCGAGCGCGAAGGCATGCGAGGACCGCACGTGCTCCACGCCGTCGGTTGTTGACATTGTGGTCGACGGTGTTTCCGAGACCATTGACCAGATGTTAGGGAACGCCTTCTGCTGGAACCGTACGGACTACGTCAGAATCCAGGCGTTTGGTTTGGGAAGCAACGCAATGAGGAAGGAGGAGGTGCTGAATGAGAGGGGACTGGAGTCGTTACCGTTTGGCGGGAAGCGGTTACTGACGGAGACTAACGGAAACAGAATACATAGCTTCGTGCAACGTCTTGTTGCGACCGGAAAACCGAGCCCGCCGTCTAGTCCTTGCAAGGATTCCGCCGTTAACCCCCTCGCTAACGGCCGCTAG 1140 0.564 MELSKVTLEIFSKLEHKWLSHCKVTNKTRILSIDGGGTTAIVAGVALIHLEDQIRLHTSDPHAHIADFFDIVAGTGIGAILAAMITAGDAFGRPLYTAREAVRLVSERNSELYKLKSAGVFRRRRRFSSRSMDNVLKQVFQRKEDGRLLTLKDTCKPLLIPCFDLKSSAPFVFSRADASESPSFNFELWKVCRATSATPSHFKPFQFASVDGKTSCSAVDGGLVMNNPTAAAVTHVLHNKRDFPSVNSVEDLLVLSLGNGSSSAKACEDRTCSTPSVVDIVVDGVSETIDQMLGNAFCWNRTDYVRIQAFGLGSNAMRKEEVLNERGLESLPFGGKRLLTETNGNRIHSFVQRLVATGKPSPPSSPCKDSAVNPLANGR* 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g0232 379 MobiDBLite consensus disorder prediction 357 379 - -
Apr8g0232 379 Pfam Patatin-like phospholipase 31 232 IPR002641 GO:0006629
Apr8g0232 379 CDD Pat17_PNPLA8_PNPLA9_like 30 309 - -
Apr8g0232 379 Gene3D Cytosolic phospholipase A2 catalytic domain 16 360 - -
Apr8g0232 379 ProSiteProfiles Patatin-like phospholipase (PNPLA) domain profile. 31 233 IPR002641 GO:0006629
Apr8g0232 379 PANTHER PATATIN-LIKE PROTEIN 6 2 368 - -
Apr8g0232 379 SUPERFAMILY FabD/lysophospholipase-like 25 311 IPR016035 -
Apr8g0232 379 PANTHER PATATIN 2 368 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g0232 Apr-Chr8 1826398 1827687 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g0232 1 379 Acyl Lipid Metabolism Gene Families AT3G63200 72.208 0.0 576
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g0232 - - gmx:100777557 682.559
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr8g0232 8 1826398 1827687 Apr8g0232 8 1826398 1827687 ECH
Apr4g1067 4 8928052 8929563 Apr8g0232 8 1826398 1827687 PCT