Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g1067 ATGGAGCTTAGCAAAGTCACGCTGGAGATCTTCTCCAAACTGGAGCAGCAATGGCTCTCACACTACGAAGCCACCACCAAAACCCGCATACTCAGCATTGACGGCGGAGGAACCACTGCCATTGTCGCCGGCGCCGCTCTCATCCACCTCGAGGACCAGATCCGCGTCCAAACATCCGATCCTGACGCTCAAATCGCTGATTACTTTGACATCATTGCCGGCACCGGCATTGGCGCCCTCCTTGCCGCCATGATCACCGCCGACGATGGCTTCGGCAGGCCTCTCTATACCGCCAGAGACGCCGTTCAGTTCATCGCCGAGAGCAACAGGAAACTCTACAATCCGAAACACACCGGAGTTTTTCGCCGACACCGGAGATTCTCCTCGAGTAGCATGGAAAAGGCGTTGAAGCAAGTGTTCCAGAGGAAAGATAAAGAAGGACGGTTGTTGACCATAAAGGACACGTGTAAGCCCCTGCTTATCCCTTGCTTTGACCTCAAGAGTTCGGCGCCATTCGTGTTCTCCCGAGCCGACGCGTCCGAGTCACCGAGTTTCAACTTCGAGCTTTGGAAGGCGTGCCGCGCCACGTCAGCCACGCCGGGCCTCTTCAGCCCCTTCCATTTCGCCTCCGTCGACGGCAAGACCTATTGCTCCGCCGTGGACGGCGGTTTGGTGATGAACAATCCGGCGGCCGCCGCGGTCACGCACGTCCTCCACAACAAACGCGATTTCCCGTCGGTGAACGGCGTGGAGGATCTCCTGGTGCTTTCCATCGGAAACGGAGCGCCGGCGAAGAGAGTGCACGACGTCCGCGAATGCTCGACGTCGTCGGTAGTTGACATTGCTCTCGACGGCGTTTCCGAGACTGTTGACCAGATGTTAGGGAACGCCTTCTGTTGGAACCGTACGGACTATGTCAGGATTCAGGCATTCGGTTTGGGTGGCGAAGTAACGAAGGCGGAAGAAAAGAAGGTGCTGAATGAAAGAGTCTTAGAATCGTTACCGTTTGGCGGCAAGCGGTTACTGCAGGAAACTAACGGTAATAGAATCAAGAGCTTTGTGCAACGCCTTGTTGCAAACGGAAAGACTAGTCTGCCACCTAGTCCCTGCAAGGTTCCGCCGTACGCCTCTCGCTAA 1137 0.562 MELSKVTLEIFSKLEQQWLSHYEATTKTRILSIDGGGTTAIVAGAALIHLEDQIRVQTSDPDAQIADYFDIIAGTGIGALLAAMITADDGFGRPLYTARDAVQFIAESNRKLYNPKHTGVFRRHRRFSSSSMEKALKQVFQRKDKEGRLLTIKDTCKPLLIPCFDLKSSAPFVFSRADASESPSFNFELWKACRATSATPGLFSPFHFASVDGKTYCSAVDGGLVMNNPAAAAVTHVLHNKRDFPSVNGVEDLLVLSIGNGAPAKRVHDVRECSTSSVVDIALDGVSETVDQMLGNAFCWNRTDYVRIQAFGLGGEVTKAEEKKVLNERVLESLPFGGKRLLQETNGNRIKSFVQRLVANGKTSLPPSPCKVPPYASR* 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g1067 378 ProSiteProfiles Patatin-like phospholipase (PNPLA) domain profile. 31 234 IPR002641 GO:0006629
Apr4g1067 378 PANTHER PATATIN 2 374 - -
Apr4g1067 378 Pfam Patatin-like phospholipase 31 233 IPR002641 GO:0006629
Apr4g1067 378 SUPERFAMILY FabD/lysophospholipase-like 27 314 IPR016035 -
Apr4g1067 378 Gene3D Cytosolic phospholipase A2 catalytic domain 18 365 - -
Apr4g1067 378 CDD Pat17_PNPLA8_PNPLA9_like 30 327 - -
Apr4g1067 378 PANTHER PATATIN-LIKE PROTEIN 6 2 374 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g1067 Apr-Chr4 8928052 8929563 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g1067 1 371 Acyl Lipid Metabolism Gene Families AT3G63200 68.700 0.0 546
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g1067 - - gmx:100784729 628.632
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g1067 4 8928052 8929563 Apr4g1067 4 8928052 8929563 ECH
Apr4g1067 4 8928052 8929563 Apr8g0232 8 1826398 1827687 PCT