Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g0218 ATGTCTCTTCCACCTTCATTCCATTACTTCTTTTTCTTCTATGTCATCTGCCTCCTGTTTTGTGTTTGTCCCATTCCAACTCATGCGACAGTTCTGGTAGCACCCATTTCCAAAGACAAGTCGTCCAATCTCTTCACCCTCTCCGTCTTCCTCAAAACCCCAATTCGCCCCACAAAACTCTTCCTGGACCTCGGTTTCTTGTTCCCATGGACGGTCTGCGACGCAGGTTATAACTCTTCCTCCTTCCACGAAATCACGTGCGACCCCACTTTCTGCGCCTCCCTGGGATTCGGAGCACTATCCTGCGACAACTGCAGCGACTTCGGTCCTCCAGATCCCAATTGCGTACCCGCCAACTTGGTTTGCGGTTGCTTCCCGGAAAACCCAGTCATCAGAACGGCAGGTTCGGACGCCGTTCTGGTGGACACGCTCGCTTTACCCAGCACAGAGGGCCCACTGGTTCTTCTCCCCAACTACACCTTCGGTTGCGCACGCTCCACTTTACTCAAAGGCCTTCCCAAAAACGTAACGGGATTAGCCGCATTGGGCCGGTCCAATGTATCTTTCCCGGCCCAAATCAGCGCTTCTCTCTCCTCTCCGCGCTGCTTTGCGCTTTGCTTTCCGAGCTCTTCCAAGGCTCCAGGGGTGGCCTTCTTCGGCTCCACTGGACCCTACAATGTTTCTTCTTTTTCTTCTTCCGAAATTGACCTCTCTAAGTCCCTTATTTACACTCCCCTAATCGTCAACCCCGTTGGCGTTGGGGACACCATTATAAACTACGGCGGAAATCCCCCTTCAAATCAGCATTTCATTGGCTTGACTTCCATTCAAGTCAACGGCAAGCATGTTCCAATAAACGCAACTCTATTGAGCATAGATAAGGACAACGGTTTCGGTGGGACCAAGATCAGCACCGCTACTCCCTACACTCTCTTGGAGTCTTCCGTTCAGAAAGCCTTCACGGAGTTGTTCGTGAAGGAAGCTGCCTCCTCTGCCTTCAACCTGACGATAACGTCCCCCGTTAAGCCATTCAACGTGTGCTACCCTGCGGGAGATCTCACGGTAAACCCTGCTGGTCCCGTGGTGCCGACCGTTGATCTCGTGCTGAATGGTCTGAAAGATGATGTGATTTGGAGAATATTGGGAGCGAATTCGATGGTTAGGGTTACGAATAAAAAGAAGGGGGTGGATTTGTGGTGCTTGGGTTTTGTGGACGGTGGGGTGAATAAGAAAACGCCGATCGTGATCGGAGGGAAGCAGCTGGAAGATAATCTTCTTCAGTTTGACCTTGAAACCAACAGATTGGGATTCACCTCGTCGCTCTTGTCTCGTTCCCTCTCATGCGCTGATTTTAACGTCACTGATTCTACTCATAAATCGTAA 1383 0.5098 MSLPPSFHYFFFFYVICLLFCVCPIPTHATVLVAPISKDKSSNLFTLSVFLKTPIRPTKLFLDLGFLFPWTVCDAGYNSSSFHEITCDPTFCASLGFGALSCDNCSDFGPPDPNCVPANLVCGCFPENPVIRTAGSDAVLVDTLALPSTEGPLVLLPNYTFGCARSTLLKGLPKNVTGLAALGRSNVSFPAQISASLSSPRCFALCFPSSSKAPGVAFFGSTGPYNVSSFSSSEIDLSKSLIYTPLIVNPVGVGDTIINYGGNPPSNQHFIGLTSIQVNGKHVPINATLLSIDKDNGFGGTKISTATPYTLLESSVQKAFTELFVKEAASSAFNLTITSPVKPFNVCYPAGDLTVNPAGPVVPTVDLVLNGLKDDVIWRILGANSMVRVTNKKKGVDLWCLGFVDGGVNKKTPIVIGGKQLEDNLLQFDLETNRLGFTSSLLSRSLSCADFNVTDSTHKS* 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g0218 460 PANTHER ASPARTYL PROTEASE-RELATED 16 452 IPR001461 GO:0004190|GO:0006508
Apr8g0218 460 Pfam Xylanase inhibitor C-terminal 269 438 IPR032799 -
Apr8g0218 460 ProSiteProfiles Peptidase family A1 domain profile. 45 438 IPR033121 -
Apr8g0218 460 Pfam Xylanase inhibitor N-terminal 46 221 IPR032861 -
Apr8g0218 460 PANTHER OS05G0403000 PROTEIN 16 452 - -
Apr8g0218 460 Gene3D Acid Proteases 26 221 IPR021109 -
Apr8g0218 460 SUPERFAMILY Acid proteases 38 448 IPR021109 -
Apr8g0218 460 Gene3D Acid Proteases 224 457 IPR021109 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g0218 Apr-Chr8 1733731 1735113 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g0218 - - aprc:113873860 595.119
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr8g0218 8 1733731 1735113 Apr8g0218 8 1733731 1735113 ECH
Apr4g1087 4 9145404 9146735 Apr8g0218 8 1733731 1735113 PCT