Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g1087 ATGACCAAAATGCCTCTTCCATCATCACATTATTTCTTCTTCGCCATCTTCCTCTCTTACACTCTCCCTCCCACTCTCCAAGTTCCCCTCTTTGCTCCAATATCAAAAGACCCTTCCACGCAACTCTACACACTCTCTCTCTACCTCAAAACCCCACTCCAACCCACCAAACTCCACCTCGACCTGGGTTCCTCCTTCACCTGGCTCCTCTGCGACTCCACCTACACCTCCTCCTCCTACCACCACATTCCCTGCAACTCCTCCCTCTGCGCCTCCTTCCACTCCACGGCATGCTCCAACTGCTTCCACCCACGTGCCCCTAACTGCGCCAACGATACGTGCGCTCTCTTCCCCGAAAACCCCCTCACCCGAACCACCCTCCTGGACAACGCACTCATCGATTCCCTCGCTCTCCCCACCTCGGACGGGTCAACTCAGGGCCCACTCATTCTCATCTCCGATTTCATCTTCTCATGCTCTTCATCCTCTTTACTCCAAGGCCTAGCCACCAATGCTGCAGGCCTAGCTGCATTGGGCCGGTCCAGTAACTCACTCCCGGCCCAAATCAGCGCCGCTTTGTCCTCCTCACTGTGCTTCGCCCTATGCTTACCCGCTTCAACCTCAAGCCCAGGCGCGGCTTTCTTCGGCTCCACTGGCCCTTATTTCACTTCTTCCAAAATTGACCTCTCCAAGTTGCTTAATTACACCTCGCTCATTGTAAACCCCGTTGGGGACACCGTTATCACTCACGACGCGCAACCGTCCGATGAGTATTTTATAAACCTCACCTCCATTCTAATCAACGGTCACGCTGTTCCCATCAATTCCTCTATCTTGACCGTTGATAAGAACGGATTTGGTGGAACTAAGATCAGCACCGCCGAGCCCTACACAGTTCTGGAAACTTCCGTGTACAAACTCTTCGTAGAGCGTTTCGCGAACGCGTCCGCAGCTTTCAACTTAACGGTGACAGAAGCCGTCGAGCCGTTTGGGGTGTGCTACCCTGCGAAAGACCTGACGGAGACGCGGGTTGGACCCGCGGTGCCGACCGTTGATCTTGTTATGCAGAGCGAGGACGTGTTCTGGAGGATCTTCGGGGGGAATTCGATGGTGAGGATTGAAAGGGAAGGAGTGGATGTGTGGTGTTTGGGCTTTGTGGATGGTGGGAGCCGTAGGAGGACGCCCATTGTGATTGGCGCGTATCAGATGGAGGATAATCTCCTGCAGTTTGATCTTCATTCCAACAAACTCGGTTTTACCTCATCTTTGTTGCTACAAGCTGCCACGTGTTCTGATCTCAATGTCGCTAATTTTTACAACCACACAAAATAA 1332 0.5308 MTKMPLPSSHYFFFAIFLSYTLPPTLQVPLFAPISKDPSTQLYTLSLYLKTPLQPTKLHLDLGSSFTWLLCDSTYTSSSYHHIPCNSSLCASFHSTACSNCFHPRAPNCANDTCALFPENPLTRTTLLDNALIDSLALPTSDGSTQGPLILISDFIFSCSSSSLLQGLATNAAGLAALGRSSNSLPAQISAALSSSLCFALCLPASTSSPGAAFFGSTGPYFTSSKIDLSKLLNYTSLIVNPVGDTVITHDAQPSDEYFINLTSILINGHAVPINSSILTVDKNGFGGTKISTAEPYTVLETSVYKLFVERFANASAAFNLTVTEAVEPFGVCYPAKDLTETRVGPAVPTVDLVMQSEDVFWRIFGGNSMVRIEREGVDVWCLGFVDGGSRRRTPIVIGAYQMEDNLLQFDLHSNKLGFTSSLLLQAATCSDLNVANFYNHTK* 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g1087 443 PANTHER OS05G0403000 PROTEIN 13 434 - -
Apr4g1087 443 SUPERFAMILY Acid proteases 35 426 IPR021109 -
Apr4g1087 443 Pfam Xylanase inhibitor N-terminal 43 217 IPR032861 -
Apr4g1087 443 PANTHER ASPARTYL PROTEASE-RELATED 13 434 IPR001461 GO:0004190|GO:0006508
Apr4g1087 443 Pfam Xylanase inhibitor C-terminal 257 420 IPR032799 -
Apr4g1087 443 CDD xylanase_inhibitor_I_like 48 423 IPR033868 -
Apr4g1087 443 Gene3D Acid Proteases 24 217 IPR021109 -
Apr4g1087 443 ProSiteProfiles Peptidase family A1 domain profile. 43 420 IPR033121 -
Apr4g1087 443 Gene3D Acid Proteases 219 437 IPR021109 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g1087 Apr-Chr4 9145404 9146735 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g1087 - - pvu:PHAVU_001G149500g 575.089
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g1087 4 9145404 9146735 Apr4g1087 4 9145404 9146735 ECH
Apr4g1087 4 9145404 9146735 Apr8g0218 8 1733731 1735113 PCT