Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g0200 ATGGCGGCTGGCCCAACATCACCCTCCGATCGACCCGCAATGCTGCCTCTTCAACCTCCTCCCGTCCTCGTCTCTGACTCCTTCGCCAAGGACGCAATCATCGCCTGGTTCCGCGGTGAGTTCGCCGCCGCCAACGCCATCATCGATGCCCTCTGCGCTCACCTTGCTTGCATCGCCACCTCTCCTTCCGACTACGACGCTGTATTCGCCGCCATCCACCGCCGTAGACTCAACTGGATCCCCGTCATCCAGATGCAGAAGTACCACTCCATCGCCGACGTGACTCTCCAGCTCCGTCGACTCGCCGACGGAAAAGCGCCCAACGATGAGAAACCGATAAGCGACGAGAAAGCCACGTCGGCGGAAAGTGTTGGAATTGGTGGTGATGAACACGAGGAGTATGATTCCCCTGAGAGCGAGATTACCGATTCAGGATCTCAAGAAATGCATGCTAGTTCCATGAACATTAATATATGTTCCAATCATGAAGAGTGTGAAGGACGTTCTTCACAGTTTAAGTTAACCAAAGGTTTCACAGCAAAAGAGTCAGTGAAAGGACATATGGTGAATGTTGTAAAAGGATTGAAGTTATATGATGACATTTTCACTGATTCTGAGCTGTGCAAGCTGACAGATTTTGTGAATGAGATCCATGCTGCTGGCCAGAATGGGGAACTGTCGGGTGAAACTTTTATACTATTCAACAAGCAGATGAAAGGGAACAAAAGAGAGCTGATTCAGATGGGTGTTCCAATATTTGGACAAATAAAGGAGGACACAAAAACCAATATAGAGCCTATTCCAGCACTTCTACAGGGTGTCATTGACCACCTTATTCAATGGCAATTACTTCCAGAGTACAAAAGACCAAATGGTTGTATCATCAACTTTTTTGAAGAGGGGGAGTTTTCTCAGCCATTCCTGAAACCACCGCATCTGGATCAACCTGTGTCCACTCTACTTCTCTCTGAATCAACTATGGCTTTTGGGCGTATACTTATGAGTGAAAATGATGGGAACTACAAGGGGCCACTCATGCTCTCTTTGAAGAAGGGGTCTCTTTTAGTGATGAGAGGAAACAGTGCTGACATGGCTAGACACGTAATGTGTCCATCCCCTAACAGAAGGGTCAGCATAACCTTCTTTAGAGTGAGGCCAGACTCCAATCAATGCCAATCACCGTCTCCTACAATGACAAATGCCATTGCTATGTGGCAACCTGGCATTGCAGGCCCGTTGGTTATGCTAGCCCCGTTTCGTCCTATGACACTGGACCCCCGCAAACTTGCTGGTGGTGGGACTGGTGTTTTTCTACCCTGGAATGTGCCATCCAGAAAACCTGCAAAGCATCTTCCCCCACGTGCCCAGAAAGGAAGGCTTCTGACATTACCTTCCCCTGTTGAACCACAAATGGCAGAGTCCACATCCGAACCCAGCATTTGTGTTGAAGGTTGA 1455 0.4873 MAAGPTSPSDRPAMLPLQPPPVLVSDSFAKDAIIAWFRGEFAAANAIIDALCAHLACIATSPSDYDAVFAAIHRRRLNWIPVIQMQKYHSIADVTLQLRRLADGKAPNDEKPISDEKATSAESVGIGGDEHEEYDSPESEITDSGSQEMHASSMNINICSNHEECEGRSSQFKLTKGFTAKESVKGHMVNVVKGLKLYDDIFTDSELCKLTDFVNEIHAAGQNGELSGETFILFNKQMKGNKRELIQMGVPIFGQIKEDTKTNIEPIPALLQGVIDHLIQWQLLPEYKRPNGCIINFFEEGEFSQPFLKPPHLDQPVSTLLLSESTMAFGRILMSENDGNYKGPLMLSLKKGSLLVMRGNSADMARHVMCPSPNRRVSITFFRVRPDSNQCQSPSPTMTNAIAMWQPGIAGPLVMLAPFRPMTLDPRKLAGGGTGVFLPWNVPSRKPAKHLPPRAQKGRLLTLPSPVEPQMAESTSEPSICVEG* 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g0200 484 MobiDBLite consensus disorder prediction 445 484 - -
Apr8g0200 484 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 289 386 IPR005123 -
Apr8g0200 484 SUPERFAMILY Clavaminate synthase-like 186 385 - -
Apr8g0200 484 Gene3D - 178 393 IPR037151 -
Apr8g0200 484 PANTHER 2OG-FE(II) OXYGENASE FAMILY OXIDOREDUCTASE 410 482 - -
Apr8g0200 484 PANTHER 2OG-FE(II) OXYGENASE FAMILY OXIDOREDUCTASE 11 413 - -
Apr8g0200 484 MobiDBLite consensus disorder prediction 105 148 - -
Apr8g0200 484 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY PROTEIN-RELATED 11 413 IPR044842 GO:0003729|GO:0006402|GO:0032451
Apr8g0200 484 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY PROTEIN-RELATED 410 482 IPR044842 GO:0003729|GO:0006402|GO:0032451
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g0200 Apr-Chr8 1612607 1617826 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g0200 K10767 - gmx:100791586 822.772
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr8g0200 8 1612607 1617826 Apr8g0200 8 1612607 1617826 ECH
Apr4g1101 4 9312264 9318376 Apr8g0200 8 1612607 1617826 PCT