Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g1101 ATGGCGGCTGTCCCAGCATCGCGGACCGATCCACCAGCAATGGTGCCGCCGCCGCTCCTCGTCTCCGACTCCTTCGCCAAGGACGCCATTATCGCCTGGTTCCGCGGCGAGTTCGCCGCCGCCAACGCCATCATCGACGCACTCTGTGCTCACCTCTCACACCTCGCTGCCTCCTCCTCCGACTACGACGCCGCCTTCGCCGCTATCCACCACCGCCGACTCAATTGGATCCCTGTTATCCAGATGCAGAAGCATCACTCCATTGCTGACGTCACTCTCGAGCTTCGCAGAGTCGCTGAGAAGAAAATCGAGCCCGCAGGTGGCACCAAAAGTGAGAGTAGCTTCGACGAGAAAGGGAAAATGGAGAAGGATGTTGCCGAGAGTGTTGAAAACGGCGGCGACGAAGCTACGGTGGAGTGTGATTCGCCGGACAGTGAGATTACTGATTCAGGATCTCAAGAAATGCAACCATGTTTGGTGAATAGTAATATATGTTCCAATCATGAAGAATGTGAAGCACGTTCTTCACAGATAAAGCTGACAAAAGGTTTCACAGCAAAGGAATCCGTGAAGGGGCATATGGTGAATGTTGTGAAAGGATTAAAGTTGTATGAGGACGTTTTTTCTGAATCAGAAATCTGCAAGCTGACTGATTTTGTAAATGAGATTCATGCTGCTGGCCAGAACGGGGAACTCTCAGGTGAAACTTTTATATTATTCAACAAACAAATGAAGGGGAACAAGAGAGAGCTGATTCAGTTGGGTGTTCCGATTTTTGGCCAGATAAAGGACGATGCCAAAAGCAATATAGAGCCAATTCCAGCACTTCTCCATGGTGTCGTTGATCATCTTATTCAATGGCAATTAATTCCAGAATATAAAAGGCCAAACGGTTGTATCATCAACTTTTTTGAAGAGGGGGAATTTTCTCAGCCATTCCTGAAACCACCGCATTTGGACCAACCTGTATCCACCCTTCTTCTCTCTGAATCAACTATGGCTTTTGGACGTATTCTTATGAGTGAAAATGATGGGAACTACAAGGGGCCACTCATGCTCTCATTGAAGAGAGGATCTCTTTTAGTAATGAGAGGAAACAGTGCTGACATGGCAAGGCACGTGATGTGTCCGTCTCCTAACAGAAGGGTGAGCATCACCTTTTTTAGAGTGAGGCCAGACTCTAATCAATGTCAATCACCAACTCCAACCATGACAACTGCGATGACTCTTTGGCAACCTGGCATTGCTAGTCCATTTACTTTGCCAAATGGAGCTCTAAGTGGCTATGAGGCTATGGATATGATGCCCAAATGGGGAATACTTAGTGCTCCAATGGTTATGCTAACCCCTATGCGCCCTATGGCAGTGAACCCCCGCAAACTACCTCGGGGTGGGACGGGGGTTTTCTTGCCTTGGAAAGGGGCATCCAGAAAACACGCGAGGCATCTTCCACCGCGTGCCCAAAAAGGACGCCTTATGGCGTTACCTTCTCCAGTCGAATCACACATGGGAGAGTCCACTTCTGAACCCAGCATTACTGTTGAAGGATAG 1551 0.4874 MAAVPASRTDPPAMVPPPLLVSDSFAKDAIIAWFRGEFAAANAIIDALCAHLSHLAASSSDYDAAFAAIHHRRLNWIPVIQMQKHHSIADVTLELRRVAEKKIEPAGGTKSESSFDEKGKMEKDVAESVENGGDEATVECDSPDSEITDSGSQEMQPCLVNSNICSNHEECEARSSQIKLTKGFTAKESVKGHMVNVVKGLKLYEDVFSESEICKLTDFVNEIHAAGQNGELSGETFILFNKQMKGNKRELIQLGVPIFGQIKDDAKSNIEPIPALLHGVVDHLIQWQLIPEYKRPNGCIINFFEEGEFSQPFLKPPHLDQPVSTLLLSESTMAFGRILMSENDGNYKGPLMLSLKRGSLLVMRGNSADMARHVMCPSPNRRVSITFFRVRPDSNQCQSPTPTMTTAMTLWQPGIASPFTLPNGALSGYEAMDMMPKWGILSAPMVMLTPMRPMAVNPRKLPRGGTGVFLPWKGASRKHARHLPPRAQKGRLMALPSPVESHMGESTSEPSITVEG* 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g1101 516 Gene3D - 184 399 IPR037151 -
Apr4g1101 516 SUPERFAMILY Clavaminate synthase-like 191 391 - -
Apr4g1101 516 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY PROTEIN-RELATED 3 514 IPR044842 GO:0003729|GO:0006402|GO:0032451
Apr4g1101 516 PANTHER 2OG-FE(II) OXYGENASE FAMILY OXIDOREDUCTASE 3 514 - -
Apr4g1101 516 MobiDBLite consensus disorder prediction 129 153 - -
Apr4g1101 516 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 295 392 IPR005123 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g1101 Apr-Chr4 9312264 9318376 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g1101 K10767 - gmx:100796344 897.116
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g1101 4 9312264 9318376 Apr4g1101 4 9312264 9318376 ECH
Apr4g1101 4 9312264 9318376 Apr8g0200 8 1612607 1617826 PCT