Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g0199 ATGAATTTCTTCAAATCCGTTTTCTTAGACGACCCGGATCCTCTCCAACCCGAATCCGAATCCAACAATGCGGCCCATAACAAAGACCCGGATCCAGAGTCCTCCTCGCCAACGAAACCCCTATCCACCACCGGCGATTCCGGTGGCGGCGACGGTTGGAACTTCGGGGGCCTGTTCAAAACCTTGACGGAGAAATCGGAATCCATAATCGAGACTTACCGTCGCGATCTGCAAGAATTCGGCACGGGTTTGAAGAAGGAGATTGAGGTGGCGCATGGTTCTCTCGGGACAGTGGGTCACGCCATCGACGAGTTTGGAAACACCGTCGTCAAAGGAACGGCTCAGATCATATCTCAAGGTAAGGATGCTATCCTCGCTGGCGATCTCGATTCTGATTCCGATAACGGAAGCAGCAATCGCAAACGCGTTAGCGGAAAGAGCTCGGATTCGAAGCGGTACAGTAGGTTCGAGGCTCAGGTTCGTGCTATTCAGGGTGATGTTAGCACTTACTCCGAGGAGCCAGAGGATTTGAGTGAGTTCAATGAGTGGAAATTAGGGTTTTCGTTGGATGGGAAAAGTGAGGAAATGGAGGGATATTTCAGAGAGAATGATGCTATGGAGAGTGTTTATAAAAGGGTTGTTCCAAACATTGTTGATCATGAAACGTTCTGGTCTAGGTATTATTATAAGGTTTATAGGCTCAAGAAAGCTGAAGATGTTAGGGCTAGGCTTGTGAGGCGAATTTCCAAGGAAGAGGAATTGAGTTGGGATGTTGAAGATGAAGATGATGATGATGATGATGATGAGGAGGAGGAGGAGTATGATGGTGAAACTAAACCTGAGCTTATGATCAATAAGGAGGGTGGGGGTGAAAATGTGGTTAAAAGGATGGATACTCAGTTGCATATTGGTGGCAATGAGGGAGAAACAAAGAGACTGAATGAGGAAAAGGTGCAGCATTATGGTGAAGAGGGGTCTAAGGTTGAAAAGAGTGACAATTTATTGCAAACTGAGGAAGTTGGCAACAAGATGGATAAGTCTGTTGAGGAAAAACAAGTTGAGAAATCTGAAGTTGTTCATGAGATGGGTGGGGGAAGTAAGGAAACTGCTGCAGAGTCCGGTGTTGATAAGGCATCCAAGTTACAGGTCGATGATGCATTGAAAAAGAATGATTCTGCAGCTGAATGTGATGAGAAGGTGATAAGGGAAAGGGAGGCTGGTGATGGTAAATATCTGGGTAAAAATAACGAGTCTTTGGTGGCAGAAACTCAGCACTCGTCAAATGAGGAGGATCTTGAGTGGGATGATATTGAGGATCTTAGCAGTATTGATGAAAAGAAAGCAACTCATAGTAGTAGCACAAGCAAAGTTGATTTACGGAAGCGCCTTAGTGCTGCGGAAGAAGAGGAAGACTTGAGTTGGGACATTGAAGATGATGATGAGCCTGCTAAGGCTTAA 1458 0.4582 MNFFKSVFLDDPDPLQPESESNNAAHNKDPDPESSSPTKPLSTTGDSGGGDGWNFGGLFKTLTEKSESIIETYRRDLQEFGTGLKKEIEVAHGSLGTVGHAIDEFGNTVVKGTAQIISQGKDAILAGDLDSDSDNGSSNRKRVSGKSSDSKRYSRFEAQVRAIQGDVSTYSEEPEDLSEFNEWKLGFSLDGKSEEMEGYFRENDAMESVYKRVVPNIVDHETFWSRYYYKVYRLKKAEDVRARLVRRISKEEELSWDVEDEDDDDDDDEEEEEYDGETKPELMINKEGGGENVVKRMDTQLHIGGNEGETKRLNEEKVQHYGEEGSKVEKSDNLLQTEEVGNKMDKSVEEKQVEKSEVVHEMGGGSKETAAESGVDKASKLQVDDALKKNDSAAECDEKVIREREAGDGKYLGKNNESLVAETQHSSNEEDLEWDDIEDLSSIDEKKATHSSSTSKVDLRKRLSAAEEEEDLSWDIEDDDEPAKA* 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g0199 485 Coils Coil 234 254 - -
Apr8g0199 485 MobiDBLite consensus disorder prediction 1 57 - -
Apr8g0199 485 Gene3D BSD domain 144 246 IPR035925 -
Apr8g0199 485 MobiDBLite consensus disorder prediction 16 49 - -
Apr8g0199 485 SMART wurzfinal6 183 235 IPR005607 -
Apr8g0199 485 MobiDBLite consensus disorder prediction 399 485 - -
Apr8g0199 485 Pfam BSD domain 183 239 IPR005607 -
Apr8g0199 485 PANTHER SYNAPSE-ASSOCIATED PROTEIN 90 479 - -
Apr8g0199 485 PANTHER SYNAPSE-ASSOCIATED PROTEIN 1 90 - -
Apr8g0199 485 PANTHER PROTEIN, PUTATIVE-RELATED 90 479 - -
Apr8g0199 485 PANTHER PROTEIN, PUTATIVE-RELATED 1 90 - -
Apr8g0199 485 MobiDBLite consensus disorder prediction 342 362 - -
Apr8g0199 485 MobiDBLite consensus disorder prediction 128 150 - -
Apr8g0199 485 MobiDBLite consensus disorder prediction 134 150 - -
Apr8g0199 485 SUPERFAMILY BSD domain-like 153 240 IPR035925 -
Apr8g0199 485 MobiDBLite consensus disorder prediction 256 277 - -
Apr8g0199 485 MobiDBLite consensus disorder prediction 440 469 - -
Apr8g0199 485 MobiDBLite consensus disorder prediction 256 378 - -
Apr8g0199 485 MobiDBLite consensus disorder prediction 308 336 - -
Apr8g0199 485 ProSiteProfiles BSD domain profile. 183 235 IPR005607 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g0199 Apr-Chr8 1609100 1611777 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g0199 - - gmx:100792113 562.377
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr8g0199 8 1609100 1611777 Apr8g0199 8 1609100 1611777 ECH
Apr4g1102 4 9318989 9320392 Apr8g0199 8 1609100 1611777 PCT