Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g1102 ATGGATTTCTTTAAATCCGTTTTCTCTGACGACCCGGATCCTCCCGAATCCCAATCCGACAATGCGCACCGAAATGATTTGCCAGACGCACCGAGTAATGATTCCTTGCCGACCGAGCACCGATCCGATCCTTCCGGCACCGGTGCGTGGGACTTCGGCGGCCTATTGAAAACCCTGAGTTTGAAATCGGAATCAATTATCGAAACCTACCGTCGTGATCTTCAGGAATTCGGCACCGGTTTGAAGAAGGAAATTGAGGTTGCTCAGGGGTCTTTGGAATCGGTGGGCCACGCCATTGATCATTTAGGAAACACCGTGGTCAAAGGAACTGCTCAGATCATATCTCAGAGCAAGGATGCCATCCTCGATTCGGATAACGGAAACCACAAGAAAAGGCAAGGCGGCGAAAAGGGTTTGAGTTCGAAACGCTATTGTAGATTTGATTCGCAGGTTCGTGGCATCCAGGGTGACGTTAGTACTTACACGGAAGTGCCTGAGGATTTGGATGATTATAACAGGTGGAAATCGGAGGTTTCGTTGGAAGGGAAGAGTGACGAAATAGAGGGGATTCTTAGAGAGAATGAGACTATGGAGAGCGTTTACAAAAAGGTTGTTCCCAACACTGTTGATCGAGAAACGTTTTGGTTTAGGTATTATTATAAAGTTTATAAGCTTAAGAAAGCTGAGGATGTGAGGGCTAGGCTTGTGAAAAGAATGTCCAAGGAAGAGGAGGATTTGAGTTGGGATGTTGATGATGATGATGATGATGATGTTGATGAGGATGAGGATGAGCATGAGCATGTGGGTCATGGTAAACCGGAGCATGTGATAAAGAAGGGGGTTGGTGGTGAGAATTCTGAGTTGCAACGTGGTGGCTTTGATGATAGTGTGGTGGGAAAAAAGGCGATGAATGTGGAAGAGGTACATAACTCTGGTGAGGAGGGGTCTAAGGTAGAAAAGAGAGATGGTTTATTGCAAAGTAAGGAACTTGGTGACAAGATGGCTGAGTTTGCTGAAGAATCGAAGGTTGATAAGAGTTCAGGGGTTGTTCAGAAGATGGGTTATGGAAGCAAGGAAACTAGCAACGAAGTGGATAACACTAGGAATAAGAATAACTCTGCTGCAGATTCTGATAAGAAAGTGATAATGGAGAGGACGGATGACGCAGGAAAATCTGCAGCGGTTGCAAGTCAGCACTCGGTGCATGAGGAGGAGGAAGACCTTGAGTGGGATGAGATTGAGGATCTTAGTATAATTGATGAAAAGAAGGCAACTAGAACGGGCAGCCCAAGCAAAGTTGATTTGCGGAAGCGCCTGAATGCTGCACAAGAAGAAGAAGAAGAAGAAGAAGAAGACGACTTGAGTTGGGAAATTGAAGATGATGATGAGCCTGTTAAGGCGTGA 1404 0.4587 MDFFKSVFSDDPDPPESQSDNAHRNDLPDAPSNDSLPTEHRSDPSGTGAWDFGGLLKTLSLKSESIIETYRRDLQEFGTGLKKEIEVAQGSLESVGHAIDHLGNTVVKGTAQIISQSKDAILDSDNGNHKKRQGGEKGLSSKRYCRFDSQVRGIQGDVSTYTEVPEDLDDYNRWKSEVSLEGKSDEIEGILRENETMESVYKKVVPNTVDRETFWFRYYYKVYKLKKAEDVRARLVKRMSKEEEDLSWDVDDDDDDDVDEDEDEHEHVGHGKPEHVIKKGVGGENSELQRGGFDDSVVGKKAMNVEEVHNSGEEGSKVEKRDGLLQSKELGDKMAEFAEESKVDKSSGVVQKMGYGSKETSNEVDNTRNKNNSAADSDKKVIMERTDDAGKSAAVASQHSVHEEEEDLEWDEIEDLSIIDEKKATRTGSPSKVDLRKRLNAAQEEEEEEEEDDLSWEIEDDDEPVKA* 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g1102 467 MobiDBLite consensus disorder prediction 372 387 - -
Apr4g1102 467 MobiDBLite consensus disorder prediction 243 467 - -
Apr4g1102 467 Gene3D BSD domain 134 238 IPR035925 -
Apr4g1102 467 MobiDBLite consensus disorder prediction 416 443 - -
Apr4g1102 467 SUPERFAMILY BSD domain-like 145 231 IPR035925 -
Apr4g1102 467 SMART wurzfinal6 174 226 IPR005607 -
Apr4g1102 467 MobiDBLite consensus disorder prediction 264 281 - -
Apr4g1102 467 MobiDBLite consensus disorder prediction 353 371 - -
Apr4g1102 467 Pfam BSD domain 174 230 IPR005607 -
Apr4g1102 467 MobiDBLite consensus disorder prediction 300 346 - -
Apr4g1102 467 MobiDBLite consensus disorder prediction 444 460 - -
Apr4g1102 467 PANTHER SYNAPSE-ASSOCIATED PROTEIN 87 461 - -
Apr4g1102 467 PANTHER SYNAPSE-ASSOCIATED PROTEIN 1 87 - -
Apr4g1102 467 ProSiteProfiles BSD domain profile. 174 226 IPR005607 -
Apr4g1102 467 Coils Coil 432 452 - -
Apr4g1102 467 MobiDBLite consensus disorder prediction 24 42 - -
Apr4g1102 467 Coils Coil 225 245 - -
Apr4g1102 467 MobiDBLite consensus disorder prediction 1 49 - -
Apr4g1102 467 MobiDBLite consensus disorder prediction 246 263 - -
Apr4g1102 467 PANTHER PROTEIN, PUTATIVE-RELATED 1 87 - -
Apr4g1102 467 PANTHER PROTEIN, PUTATIVE-RELATED 87 461 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g1102 Apr-Chr4 9318989 9320392 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g1102 - - lang:109354531 456.062
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g1102 4 9318989 9320392 Apr4g1102 4 9318989 9320392 ECH
Apr4g1102 4 9318989 9320392 Apr8g0199 8 1609100 1611777 PCT