Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g0193 ATGATCTCCCCAACTCAAGACCTTCTTCAGCCCCACACCCAATTTTTCATTATGCTCAAACTCCTCAACAAGAACCTCCGCCGCTTCCTATCCCATCTTGGGTGTCCAATTCGGCGCCGATCAAAGTCCAAAGTTGTAGTGATCAACAAGTTAGGAAATCAAGGCTCAAAAACCCACCCAGATAACAAACACGAACCAAGCACGAATTTTTCAGCTGCGGTTCATCCCAACGCTCAATTGGGTAGTCCGAAACCCCAGAAGCGAATCCGGGTCGCGACCTTCAACGCTGCCCTGTTCTCCATGGCACCGGCACTACCCAAGGCAGGAGAAAAAGCTGCCACCTTTGAGGATGAAAACGATGTCGCTTCGAAGCCCAGAAACCTGAATTCGCGGTCAAAGTCGATGAACGACCGCCCCAGAAGCATATTGAAGCAATCTCAATCGCAATCTCAATCGCAATCTCAATCGCAATCAGTGAACAGAACAGAAAACCTCGGCAACAAGCAACAAAGGTTAACAAAATCAAAGATGAGAGTTTCCATCAATCTACCAGACAACGAGATTTCGCTGCTGCGAAGCCGACAATCGAGCTTCTCAGAACACGACAAGGATGGGTCGTGGTCGTGGAGACACTCGACGGGAAGTGGGATCCACATGAGTAGTAGAACGGTGGTTGAGGTTCTGAGAGAAGTGGACGCTGATGTTTTGGGTCTGCAAGATGTGAAAGCCGAGGAAGAGAATGGAATGAAGCCTTTGTCGGATTTGGCTGAGGCTTTGGGTATGAACTATGTGTTCGCTGAAAGCTGGGCTCCTGAGTACGGCAACGCTGTCTTGTCCAAATGGCCGATCAAACGCTGGAATGCTCACAAAATCTTCGATCACACTGATTTCAGGAATGTTCTGAAGGCCACCATCGATGTACCTCAAGCAGGTGAACTAAACTTTTACTGCACCCACCTTGATCATCTTGATGAGAATTGGAGGATGAAACAGGTAAATGCAATAATCCAATCAAGTGATGAGCCTCATATCTTAGCTGGAGGACTTAATTCACTCGATGAATCTGATTACTCCCAAGAAAGATGGACAGATATTGTGAAGTACTACGAAGAGATGGGAAAGCCAACACCAAAAGTTGAAGTAATGAAATATCTAAAGAGTAAAGACTACTTAGATGCTAAGGACTATGCTGGGGAATGCGAGTCAGTTGTCATGATTGCCAAGGGCCAAAGTGTCCAAGGGACATGTAAGTATGGAACTCGGGTAGACTACATATTATCATCCTCAAATTCTCAATATAAGTTTGTTCCCGGTTCCTATTTAGTTCTTTCTTCCAAAGGGACTTCGGATCATCACATAGTGAAAGTTGACTTAGTGACGGTAAATAACAATCCTCAAGAAAATGTGACACACAAACCTCAACATCCAAGACAGAGAGTTGTAAAAATAACACAATCCACTCCATCCAAAGGTATCTGGAAAACACCAGAGATTTAG 1497 0.4529 MISPTQDLLQPHTQFFIMLKLLNKNLRRFLSHLGCPIRRRSKSKVVVINKLGNQGSKTHPDNKHEPSTNFSAAVHPNAQLGSPKPQKRIRVATFNAALFSMAPALPKAGEKAATFEDENDVASKPRNLNSRSKSMNDRPRSILKQSQSQSQSQSQSQSVNRTENLGNKQQRLTKSKMRVSINLPDNEISLLRSRQSSFSEHDKDGSWSWRHSTGSGIHMSSRTVVEVLREVDADVLGLQDVKAEEENGMKPLSDLAEALGMNYVFAESWAPEYGNAVLSKWPIKRWNAHKIFDHTDFRNVLKATIDVPQAGELNFYCTHLDHLDENWRMKQVNAIIQSSDEPHILAGGLNSLDESDYSQERWTDIVKYYEEMGKPTPKVEVMKYLKSKDYLDAKDYAGECESVVMIAKGQSVQGTCKYGTRVDYILSSSNSQYKFVPGSYLVLSSKGTSDHHIVKVDLVTVNNNPQENVTHKPQHPRQRVVKITQSTPSKGIWKTPEI* 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g0193 498 Gene3D Endonuclease/exonuclease/phosphatase 206 461 IPR036691 -
Apr8g0193 498 MobiDBLite consensus disorder prediction 110 179 - -
Apr8g0193 498 MobiDBLite consensus disorder prediction 125 179 - -
Apr8g0193 498 SUPERFAMILY DNase I-like 218 458 IPR036691 -
Apr8g0193 498 PANTHER CALCOFLUOR WHITE HYPERSENSITIVE PROTEIN PRECURSOR 218 495 - -
Apr8g0193 498 PANTHER CALCOFLUOR WHITE HYPERSENSITIVE PROTEIN PRECURSOR 18 207 - -
Apr8g0193 498 MobiDBLite consensus disorder prediction 52 86 - -
Apr8g0193 498 PANTHER ENDONUCLEASE/EXONUCLEASE/PHOSPHATASE FAMILY PROTEIN 218 495 - -
Apr8g0193 498 PANTHER ENDONUCLEASE/EXONUCLEASE/PHOSPHATASE FAMILY PROTEIN 18 207 - -
Apr8g0193 498 Pfam Endonuclease/Exonuclease/phosphatase family 213 451 IPR005135 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g0193 Apr-Chr8 1556247 1563187 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g0193 - - gsj:114390420 764.992
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr8g0193 8 1556247 1563187 Apr8g0193 8 1556247 1563187 ECH
Apr4g1105 4 9330610 9333256 Apr8g0193 8 1556247 1563187 PCT