Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g1105 ATGGAGCAAGAACCTGTTCTTTCTCATTCCCACAACCACTTCCACTTCTCCATCTTCCTCAAACTCCTCAACAACAATCTCACTCATTTTTGTTCTCGTATTCGCTGGCCACGACGGCGTCGTTCCAAATCCAAGCTACTCATCAAGAGGTTCGGCAAGACCCTCCCCAAACCTCAATACGACCCAACTACCGAACCTGCATCTCCCAAACCAATACGAATCGCAACGTTCAACGCAGCACTCTTCTTCATGGCACCGGCGCTTCCTGAAGCAGAGAAAAGCGTCACGTGGGAAGAGAGCCTGGGAAGGCCAAAGTCAACACAGGAAGGACCGAGAAGCATTCTGAAGCAAACGCAATCTCCGGTGAACGGTAGGTCGAAATTGAGAGTGTCGATAAATTTACCGGAGAACGAGATATCGGTGCGGCAATCGTGGAGTTTCTCGGAACACGAGAGAAAAGGGTGGAGAATGGTGGAGGGAGGAGCAGAGAGAGAGAGACAGAGAAGAACGGTGGTTGAAGTTCTGAGAGAGTTAAACGCCGACGTTTTGGGTCTGCAAGATGTGAAAGCCGATGAAGAGAATGAGATGAAGCCTTTGTCGGATTTGGCTCGTGCTCTTGGCATGAACTACGTCTTCGCTGAAAGCTGGGCACCTCAATACGGCAACGCCGTTTTGTCTAAGTGGCCCATTAAACGCTGGAAACTACACAAACTCTTCGATCACACCGATTTCAGGAATGTTCTCAAGGCCACTATCGATGTGCCCCAAGCAGGTGAATTCAACTTTTACAGTACCCACCTTGATCATCTTGATGAGAATTGGCGGATGAAGCAGATAAATGCAATAATTCAATCTAATGATGAACCGCACATTTTAGCTGGAGGCCTTAATTCATTAGATGAATCAGATTATTCCCAAGAAAGATGGACAGATATTGTTAAGTACTATGAAGAGATGGGAAAGCCAACACCAAAGGTTGAAGTGATGAAATATCTAAAAAGCAGAGACTACACAGATGCTAAGGACTTTGCAGGGGAATGTGAGTCTGTTGTCATGGTTGCCAAAGGCCAAAGTGTCCAAGGGACATGTAAGTATGGAACTCGGGTAGATTACATATTATCATCTTCAGATTCTCCATATAAATTCGTTCCTGGGTCCTATTTAGTCCTTTCTTCCAAAGGGACTTCAGATCATCACATAGTGAAAGTTGATGTGGTAAAAGTAAGTAACAGTCCTCAAGAAAATATGATAAAGAAGCAGCGACAACCAAGACAAAAATTTGTAAGAATAAAGCAATCAACTCCATCAAATTGTATATGGAAAACTGACACTGGAGATATAGATTGA 1347 0.4454 MEQEPVLSHSHNHFHFSIFLKLLNNNLTHFCSRIRWPRRRRSKSKLLIKRFGKTLPKPQYDPTTEPASPKPIRIATFNAALFFMAPALPEAEKSVTWEESLGRPKSTQEGPRSILKQTQSPVNGRSKLRVSINLPENEISVRQSWSFSEHERKGWRMVEGGAERERQRRTVVEVLRELNADVLGLQDVKADEENEMKPLSDLARALGMNYVFAESWAPQYGNAVLSKWPIKRWKLHKLFDHTDFRNVLKATIDVPQAGEFNFYSTHLDHLDENWRMKQINAIIQSNDEPHILAGGLNSLDESDYSQERWTDIVKYYEEMGKPTPKVEVMKYLKSRDYTDAKDFAGECESVVMVAKGQSVQGTCKYGTRVDYILSSSDSPYKFVPGSYLVLSSKGTSDHHIVKVDVVKVSNSPQENMIKKQRQPRQKFVRIKQSTPSNCIWKTDTGDID* 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g1105 448 MobiDBLite consensus disorder prediction 100 122 - -
Apr4g1105 448 PANTHER CALCOFLUOR WHITE HYPERSENSITIVE PROTEIN PRECURSOR 167 444 - -
Apr4g1105 448 PANTHER CALCOFLUOR WHITE HYPERSENSITIVE PROTEIN PRECURSOR 13 145 - -
Apr4g1105 448 PANTHER ENDONUCLEASE/EXONUCLEASE/PHOSPHATASE, PGAP2-INTERACTING PROTEIN-RELATED 13 145 - -
Apr4g1105 448 PANTHER ENDONUCLEASE/EXONUCLEASE/PHOSPHATASE, PGAP2-INTERACTING PROTEIN-RELATED 167 444 - -
Apr4g1105 448 MobiDBLite consensus disorder prediction 95 122 - -
Apr4g1105 448 Pfam Endonuclease/Exonuclease/phosphatase family 162 398 IPR005135 GO:0003824
Apr4g1105 448 SUPERFAMILY DNase I-like 68 405 IPR036691 -
Apr4g1105 448 Coils Coil 175 195 - -
Apr4g1105 448 Gene3D Endonuclease/exonuclease/phosphatase 150 407 IPR036691 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g1105 Apr-Chr4 9330610 9333256 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g1105 - - gmx:100820515 620.928
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g1105 4 9330610 9333256 Apr4g1105 4 9330610 9333256 ECH
Apr4g1105 4 9330610 9333256 Apr8g0193 8 1556247 1563187 PCT