Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g0188 ATGGCGAAGTGCATCAGTGCTTTACACGCAGTGGTTGTGCTTTTCTTCTGCTTCCTACAAACGCACCTTCACGTTGTCGCCATTTTGGACCCAGCTGATTTCTTAGCTCTGCAATCCATTCGTAAGGCTCTCGAGGACATGCCAGGTTCTGATTTCTTCGCTTCCTGGGATTTCACCGCAGACCCTTGCAACTTTGCCGGCGTTTACTGCGATTCCGATAAGGTCATCGCCCTCAACCTCGGCGACCCCAAGGCCGGTTCCCCGGGTCTCACTGGCCGCCTCGACGCAGCCATCGGCAAGCTCTCTTCTCTCGCTGAGTTCACCATCGTTCCCGGAAGAATATACGGTCGTCTACCCGAATCTCTATCCAATTTGAAGAACCTGAGGTTCCTCGGCGTTAACCGAAACTTTATCTCCGGCGAAATTCCGGCAGGGTTAGGCGAGTTGCGCAACCTTCGAACCATCGATCTCAGCTACAACCAGCTCACCGGACGCATTCCTCCCACGGTAGGATCCTTACCGGAGCTAACGAACTTGATCCTCTGCCACAACCGTCTCTCCGGTTCGGTTCCCCGGTTCCAGTCGCGAACACTAACCCGACTGGACCTGAAGCACAACGCTCTCTCCGGTTCGCTGGCTCCCAACTCTCTCCCTCCGTCTCTGCAGTACCTCTCTCTGTCGTGGAACCAACTCAGCGGGCCAATGGACAAGCTTCTGGGCCGGTTGGAGCAGCTGAACTATTTGGACCTAAGCCTGAACCAGTTCACGGGCCCAATCCCGGGGCGAATCTTTTCGTTCCCTTTGACGAGTCTCCAATTAGAGAGGAACCAGTTTTCAGGAGCTGTGGAACCGGTGGATCAGGTGACGATCCCAACCGTTGATCTGAGTTACAATCGGTTATCGGGTGAAATATCGGGCCTGTTGGCGAGCGTGCAGAACCTGTACCTGAACAACAACCGGTTCACGGGTCGGGTACCCGCTAGCTTCGTGGAGCGGTTGTTGGATGCGAGCATTCAGATACTGTATTTGCAACATAACTATCTAACGGGAATTGAGATAAGCCCAACGGCGGTGATTCCAGAGAGAAGCTCGCTGTGTCTGCAGTATAATTGCATGGTCCCGCCCGTAGAGACTCCCTGCCCTTTGAGGGCTGGCAAGCAGAAATCACGCCCAACTCAGCAGTGCAACCAATGGAGGCCCTGA 1203 0.5461 MAKCISALHAVVVLFFCFLQTHLHVVAILDPADFLALQSIRKALEDMPGSDFFASWDFTADPCNFAGVYCDSDKVIALNLGDPKAGSPGLTGRLDAAIGKLSSLAEFTIVPGRIYGRLPESLSNLKNLRFLGVNRNFISGEIPAGLGELRNLRTIDLSYNQLTGRIPPTVGSLPELTNLILCHNRLSGSVPRFQSRTLTRLDLKHNALSGSLAPNSLPPSLQYLSLSWNQLSGPMDKLLGRLEQLNYLDLSLNQFTGPIPGRIFSFPLTSLQLERNQFSGAVEPVDQVTIPTVDLSYNRLSGEISGLLASVQNLYLNNNRFTGRVPASFVERLLDASIQILYLQHNYLTGIEISPTAVIPERSSLCLQYNCMVPPVETPCPLRAGKQKSRPTQQCNQWRP* 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g0188 400 Pfam Leucine rich repeat N-terminal domain 31 71 IPR013210 -
Apr8g0188 400 Gene3D Ribonuclease Inhibitor 220 288 IPR032675 -
Apr8g0188 400 Pfam Leucine Rich Repeat 151 173 IPR001611 GO:0005515
Apr8g0188 400 PANTHER LRR RECEPTOR-LIKE KINASE 10 397 - -
Apr8g0188 400 PANTHER LEUCINE-RICH REPEAT (LRR) FAMILY PROTEIN 10 397 - -
Apr8g0188 400 Gene3D Ribonuclease Inhibitor 30 219 IPR032675 -
Apr8g0188 400 Pfam Leucine Rich repeat 195 210 IPR001611 GO:0005515
Apr8g0188 400 Pfam Leucine Rich repeat 219 233 IPR001611 GO:0005515
Apr8g0188 400 SUPERFAMILY L domain-like 49 373 - -
Apr8g0188 400 Gene3D Ribonuclease Inhibitor 289 373 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g0188 Apr-Chr8 1515781 1517339 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g0188 28 350 Receptor kinase-like Gene Family AT3G51740 34.435 3.51e-38 144
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g0188 - - gmx:100800224 689.878
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr8g0188 8 1515781 1517339 Apr8g0188 8 1515781 1517339 ECH
Apr4g1112 4 9409525 9411180 Apr8g0188 8 1515781 1517339 PCT