Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g1112 ATGGAAATTACTTACTTTTCTCTGCTTTTCATGTTCTTCCTGCAATCCGTGCAAAGCATATTGGACCCCAACGATTTCTTGGCTCTGCAATTAATTCGCAAGTCCCTTCACGATGTTCCCGGTTCCAATTTCTTCGCTTCTTGGGACTTCACCGCCGATCCCTGCAACTTCGCCGGCGTTTATTGTGCCTCCGATAGGGTCATTGCGCTGAACCTCGGCGACCCCAGGGCCGGTTCCCCCGGTCTCACCGGCAAAATAGACCCTTCCATTTCCAAGCTCTCTGCTCTTGCTGACTTCACTGTCGTTCCCGGAAGAATATACGGTCCTCTTCCCCAATCCCTCTCCCAATTAAAAAACCTCCGTTTCCTCGGCGTCAGCCGCAACTTCATCTCCGGCCAGATTCCGGCCGGTTTGGCTCAGCTCGGTCACCTCCGAACCATCGATCTCAGCTACAACCAACTCACCGGAGCAATTCCTCCGTCCATCGGAACCTTACCGGAACTAACCAACCTAATCCTCTGCCACAACCGCCTCTCCGGTTCGGTTCCCTCTTTCGCTTCGGCTCGTACCCTAACCCGGCTCGAACTCAAACACAACTCTCTCTCTGGTTCGCTCAGCTCCAATTCTCTCCCTCCCTCGCTCCAGTACCTCTCTCTTTCCTGGAACCAGCTCAGCGGACCGGTGGACCGGCTCTTAACCCGGCTCAACCGGCTTAACTACCTTGACCTCAGCTTGAACCAATTCTCGGGAACCGTCCCGGCTCGACTGTTCTCATTCCCACTAACCAATCTTCAACTACAAAGAAACCAATTTACCGGTCCGGTCCAACCGGTAAACGAAGTAACGATCCAAACCGTTGATCTAAGCTACAACCGGTTATCCGGTGGAATATCACCCTTGCTCGCGAGCGTGCAGAACCTGTACCTGAATAACAACGATTTCACGGGTCAGGTTCCGGGCAGCTTCGTGGAACGGTTATTGGCGGCGAGTATTCAGATACTGTACTTGCAGCACAATTACCTGACCGGAATCGCGATAAGCCCGACGGCGGAGATTCCGGTGAGCAGCACGGTGTGTTTGCAGTATAATTGCATGGTGCCTCCTATTCAAACCGCGTGCCCGTTAAAAGCTGGCAAGCAGAAAATCAGGCCTTCTCAGCAGTGTAACCGCTGA 1173 0.532 MEITYFSLLFMFFLQSVQSILDPNDFLALQLIRKSLHDVPGSNFFASWDFTADPCNFAGVYCASDRVIALNLGDPRAGSPGLTGKIDPSISKLSALADFTVVPGRIYGPLPQSLSQLKNLRFLGVSRNFISGQIPAGLAQLGHLRTIDLSYNQLTGAIPPSIGTLPELTNLILCHNRLSGSVPSFASARTLTRLELKHNSLSGSLSSNSLPPSLQYLSLSWNQLSGPVDRLLTRLNRLNYLDLSLNQFSGTVPARLFSFPLTNLQLQRNQFTGPVQPVNEVTIQTVDLSYNRLSGGISPLLASVQNLYLNNNDFTGQVPGSFVERLLAASIQILYLQHNYLTGIAISPTAEIPVSSTVCLQYNCMVPPIQTACPLKAGKQKIRPSQQCNR* 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g1112 390 PANTHER LRR RECEPTOR-LIKE KINASE 3 390 - -
Apr4g1112 390 PANTHER LEUCINE-RICH REPEAT (LRR) FAMILY PROTEIN 3 390 - -
Apr4g1112 390 SUPERFAMILY L domain-like 28 365 - -
Apr4g1112 390 Gene3D Ribonuclease Inhibitor 212 376 IPR032675 -
Apr4g1112 390 Pfam Leucine Rich repeat 212 226 IPR001611 GO:0005515
Apr4g1112 390 Pfam Leucine rich repeat N-terminal domain 23 62 IPR013210 -
Apr4g1112 390 Gene3D Ribonuclease Inhibitor 22 210 IPR032675 -
Apr4g1112 390 Pfam Leucine Rich Repeat 143 163 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g1112 Apr-Chr4 9409525 9411180 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g1112 25 343 Receptor kinase-like Gene Family AT3G51740 33.521 5.06e-36 138
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g1112 - - gmx:100817314 667.922
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g1112 4 9409525 9411180 Apr4g1112 4 9409525 9411180 ECH
Apr4g1112 4 9409525 9411180 Apr8g0188 8 1515781 1517339 PCT