Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g0168 ATGGACAAGGTGATGAGGTTGGCCTCAGAAAAGGGTGTGGTGGTTTTCACCAAGAGCTCTTGTTGCCTTTGCTATGCAGTCAACATTCTATTCCAAGAACTTGGAGTGACCCCTGTGGTTCATGAGATTGACAAAGACCTTGAAGGCAAGGAAATGGAGAAAGCTCTAACTAGGTTGGGTTGTAACCCACCAGTCCCCGCAGTATTCATAGGAGGAAAGTTGGTGGGGTCCACCAATGAAGTCATGTCCCTCCACCTCAGTGGTTCATTGACTCCACTTCTGAAACCATATCGAGCTTTATCTTAA 306 0.4673 MDKVMRLASEKGVVVFTKSSCCLCYAVNILFQELGVTPVVHEIDKDLEGKEMEKALTRLGCNPPVPAVFIGGKLVGSTNEVMSLHLSGSLTPLLKPYRALS* 102
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g0168 101 PANTHER GLUTAREDOXIN 1 100 IPR011905 -
Apr8g0168 101 CDD GRX_GRXh_1_2_like 13 93 - -
Apr8g0168 101 PANTHER MONOTHIOL GLUTAREDOXIN-S2 PROTEIN 1 100 - -
Apr8g0168 101 TIGRFAM GlrX-like_plant: glutaredoxin-like family 4 100 IPR011905 -
Apr8g0168 101 SUPERFAMILY Thioredoxin-like 1 99 IPR036249 -
Apr8g0168 101 Pfam Glutaredoxin 13 75 IPR002109 -
Apr8g0168 101 Gene3D Glutaredoxin 1 101 - -
Apr8g0168 101 ProSiteProfiles Glutaredoxin domain profile. 1 101 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g0168 Apr-Chr8 1280099 1280738 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g0168 1 100 Miscellaneous Gene Families AT4G15660 53.000 2.95e-37 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g0168 K03676 - gmx:100527558 184.111
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr8g0168 8 1280099 1280738 Apr8g0168 8 1280099 1280738 ECH
Apr4g0454 4 3840707 3841422 Apr8g0168 8 1280099 1280738 PCT
Apr8g0168 8 1280099 1280738 Apr4g0455 4 3843147 3843455 PCT