Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g0454 ATGGACAAGGTGACGAGGTTGGCGTCTGAAAAGGGTGTGGTGATTTTCACAAAGAGTTCTTGTTGCCTTTGCTATGCAGTCAACATTCTGTTTCAAGAACTTGGGGTGAGTCCTGTGGTTCATGAGATTGATCATGACCCTGAAGGCAGAGAAATGGAGAAAGCTCTATTCAGGTTAGGTTGTAATGCTCCTGTCCCGGCTGTGTTCATTGGAGGGAAGCTAATGGGATCCACCAATGAAGTCATGTCCCTCCACCTAAGTGGTTCACTCACTCAATTGCTGAAACCTTATCAGACTTTATCTTGA 306 0.4542 MDKVTRLASEKGVVIFTKSSCCLCYAVNILFQELGVSPVVHEIDHDPEGREMEKALFRLGCNAPVPAVFIGGKLMGSTNEVMSLHLSGSLTQLLKPYQTLS* 102
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g0454 101 CDD GRX_GRXh_1_2_like 13 93 - -
Apr4g0454 101 Pfam Glutaredoxin 13 74 IPR002109 -
Apr4g0454 101 TIGRFAM GlrX-like_plant: glutaredoxin-like family 4 99 IPR011905 -
Apr4g0454 101 PANTHER GLUTAREDOXIN 1 100 IPR011905 -
Apr4g0454 101 Gene3D Glutaredoxin 1 101 - -
Apr4g0454 101 SUPERFAMILY Thioredoxin-like 1 97 IPR036249 -
Apr4g0454 101 ProSiteProfiles Glutaredoxin domain profile. 1 101 - -
Apr4g0454 101 PANTHER MONOTHIOL GLUTAREDOXIN-S2 PROTEIN 1 100 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g0454 Apr-Chr4 3840707 3841422 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g0454 1 95 Miscellaneous Gene Families AT4G15670 50.526 4.61e-33 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g0454 K03676 - gmx:100305984 194.126
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g0454 4 3840707 3841422 Apr8g0168 8 1280099 1280738 PCT