Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g0163 ATGGGAGTTGTCACTGTTGGAGAACTGAAGCCCAGCATTTCAGGGAAGAGGACCTTTCGTCCAAGTTCAAGCATAAGACATGCCACTGAATGGCCCATATCTGATGTCTCCAGTGATCTTACCATTGAAGTTGGAGCCTCAAGCTTTTCACTTCACAAGTTTCCACTGGTTTCTCGGAGTGGAAGAATTAGGAAACTACTGTTAGAAGCAAAAGATTCTAAAGTTTCACGCATTAGTCTCCCAAATGTGCCAGGAGGTGCAGAGGCATTTGAGCTTGCTGCCAAATTCTGTTATGGGATCAATGTTGAGTTCACCCTCTCCAATGTTGCTATGCTAAAATGTGTAGCACATTTTCTACAAATGACAGAAGAGTTTGCAGAGAAAAACTTAGAGACAAGAGCTGAAGCATATTTAAATGACACAGTGCTTCCAAATATATCAAGCACAATATCAGTTCTTCACCGTTGTGAAACTCTTCTTCCCATTTCGGAAGAGATCAACCTTGTTAGCAGGCTAATCAATGCAATTGCAAACAATGCATGCAAAGAACAACTTACCTCTGGTTTGCAAAAACTTGACCATAACTTTCCGTCTAAAACCATATCAAACATGGAACCTGAAACACCCTCAGAATGGTGGGGAAAATCTCTCAACGTTCTTAGTCTTGATTTCTTCCAAAGAGTTCTATCTGCAGTGAAATCAAAGGGGCTAAAACAAGACATGATCAGTAAAATTTTGATAAACTATGCACACAGTTCTCTTCAAGGGATGGTTGTTAGAGACCCTCAAGTAGTCAAAGGAAGTTCACCAGACTTAGAATTGCAAAAGAAACAAAGGGTCATTGTTGAAGCCATAGCTAGCTTATTACCAACTCAATCAAGGAAAAGCCCTGTTCCAATGGCTTTTCTCTCTAGTTTGTTGAAAGCTGCAATAGCAGCATCAGCATCCACTTCTTGCAGATCGGATTTGGAGAGAAGGATTGGCTTACAACTTGACCAGGCAATTCTTGAAGACATCCTAATCCCAATGAACTCATATCAAAACACACACGGCACTATTTATGACACAGATTCCATTTTGAGGATATTTTCCAATTTTCTAAACTTGGATGAGGAGGATGAGGAGGATAGTCACTTGAGAGATGAAAGTGAAATGGTTTATGACTTTGACAGCCCAGGATCTCCAAAACAAAGCTCAATTCTTAAGGTGTCTAAATTAATGGACAACTATCTTGCTGAAGTAGCACTAGACTCAAACTTGTTGCCATCAAAGTTCATATCACTTGCTGAACTACTTCCAGATCATGCACGTATTGTGAGTGATGGACTCTATAGAGCTGTTGATATCTTTCTTAAGGTTCATCCAAACATAAAGGACTCAGAGAGGTACAGACTCTGCAAAACCATAGATTGTCAGAAACTGTCTCAAGAAGCATGCAGCCATGCAGCACAAAATGAAAGACTACCAGTGCAAATGGCAGTTCAAGTTCTATACTTCGAGCAAATAAGGCTTCGAAATGCAATGAACGGAGGGCACAACCAATTCTTCTTTGGAGGACTAAATGGTCAATTCCCTCAACGTTCAGGAAGTGGTGCAGGAAGTGGAGCCATTTCCCCCAGAGACAACTATGCATCAGTGAGAAGAGAGAACCGAGAGCTCAAACTTGAAGTTGCAAGAATGAGAATGAGACTCACTGACTTAGAGAAAGACCATGTTTCTATGAAGCAAGAACTAGTAAGGTCCCACCCTGCCAACAAGCTTTTCAAATCATTCACCAAAAAACTATGCAAACTCAATGCTCTATTTCGGATTAATAGCATCAAGCCAAATGGTGCCACGTCTGAGACTCGCTTCCCTTTTCCTAAGAGAAGGCGTCACTCAGTTTCATGA 1890 0.4106 MGVVTVGELKPSISGKRTFRPSSSIRHATEWPISDVSSDLTIEVGASSFSLHKFPLVSRSGRIRKLLLEAKDSKVSRISLPNVPGGAEAFELAAKFCYGINVEFTLSNVAMLKCVAHFLQMTEEFAEKNLETRAEAYLNDTVLPNISSTISVLHRCETLLPISEEINLVSRLINAIANNACKEQLTSGLQKLDHNFPSKTISNMEPETPSEWWGKSLNVLSLDFFQRVLSAVKSKGLKQDMISKILINYAHSSLQGMVVRDPQVVKGSSPDLELQKKQRVIVEAIASLLPTQSRKSPVPMAFLSSLLKAAIAASASTSCRSDLERRIGLQLDQAILEDILIPMNSYQNTHGTIYDTDSILRIFSNFLNLDEEDEEDSHLRDESEMVYDFDSPGSPKQSSILKVSKLMDNYLAEVALDSNLLPSKFISLAELLPDHARIVSDGLYRAVDIFLKVHPNIKDSERYRLCKTIDCQKLSQEACSHAAQNERLPVQMAVQVLYFEQIRLRNAMNGGHNQFFFGGLNGQFPQRSGSGAGSGAISPRDNYASVRRENRELKLEVARMRMRLTDLEKDHVSMKQELVRSHPANKLFKSFTKKLCKLNALFRINSIKPNGATSETRFPFPKRRRHSVS* 630
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g0163 629 Gene3D Potassium Channel Kv1.1; Chain A 24 142 IPR011333 -
Apr8g0163 629 Pfam NPH3 family 211 479 IPR027356 -
Apr8g0163 629 ProSiteProfiles BTB domain profile. 38 106 IPR000210 GO:0005515
Apr8g0163 629 SUPERFAMILY POZ domain 22 123 IPR011333 -
Apr8g0163 629 Pfam BTB/POZ domain 37 138 IPR000210 GO:0005515
Apr8g0163 629 ProSiteProfiles NPH3 domain profile. 211 503 IPR027356 -
Apr8g0163 629 PANTHER OS12G0117600 PROTEIN 25 622 IPR043454 -
Apr8g0163 629 Coils Coil 543 577 - -
Apr8g0163 629 PANTHER BTB/POZ DOMAIN-CONTAINING PROTEIN SETH6 25 622 - -
Apr8g0163 629 SMART BTB_4 38 130 IPR000210 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g0163 Apr-Chr8 1246968 1251120 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g0163 1 453 EF-hand Containing Proteins AT2G47860 60.619 0.0 555
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g0163 - - gmx:100814622 1084.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr8g0163 8 1246968 1251120 Apr8g0163 8 1246968 1251120 ECH
Apr4g0460 4 3863901 3867610 Apr8g0163 8 1246968 1251120 PCT