Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g0460 ATGGGAGTTGTAACTGTTGGTGAATTGAAGCCTAGCGTTTCAGGAAAAAGGACTTTTCGTCCAAGTTCAAGCATAAGACAAACAGCTGAATGGCCAATATCTGACGTCTCTAGTGATCTTACCATTGAAGTAGGAACATCAACCTTTGCACTTCACAAGTTTCCTCTTGTTTCCCGGAGTGGAAGAATTCGGAAGCTGGTCTTAGAAGCAAAAGATTCAAAAGTTTCACGCGTAAGTCTCCCAAGTGTGCCAGGTGGTGCAGAGGCATTTGAGCTTGCTGCCAAATTCTGCTATGGAATCAATGTTGACTTCACACTCTCAAATGTTGCTTTGCTACGTTGCACAGCTCATTTTCTTGAAATGACAGAAGAACTTGCAGAAAAAAACTTAGAGTCTAGAGCTGAATCATATCTAAGGGACACAGTGCTCCCTAATATACCAAACACCATACATGTTCTTCACTGTTGTGAGACTCTTCTTCCCATGTCAGAAGAAATAAACCTTGTCAATAAGCTAATCATTGCAATTGCAAATAACGCATGCAAAGAGCAACTTACATCTGGTTTACTAAAACTTGATCACACTTTCCCTTCTAAATCTATACCAACCATGGAACCAGAAACACCCTCAGATTGGTGGGGCAAGTCTTTCAATGTTCTTAGTCTTGAGTTCTTCCAACGAGTTGTATCTGTTGTGAAGTCAAAGGGACTAAAACAAGACATGATCAGCAAGATTTTGATGAACTATGCACATAGTTCCCTTCAAGGGATTGGTGTTAGAGATCCTCAAGTGGTCAAAGGAAGTCTAATTGACATGGAACAACAGAAGAAACAAAGGATCATTGTTGAAACCATAGTTGGCTTACTCCCAACTCAATCAAGAAAAAGTCCGGTTCCAATGGCATTTCTCTCTAGTTTATTGAAAGCTGCAATAGCAACATCAGCTTCAACTCCTTGCAAATCTGATTTGGAGAGGCGAATTGGTCTACAACTTGACCAGGCAATTCTTGAAGACATCTTGATTCCAACAAACTCACCTCCAAATACCCTCGTCACAATGTATGACACAGATTCAGTTCTGAGGATCTTTTCTATTTTCCTTAACTTGGATGAGGAGGATGGCGAAGACAGTGATAACTTTGTTGATGAAAGCCAAATGGTGTATGACTTTGACAGTCCTGGATCTCCAAAACAAAGCTCAATTCTTAAGGTATCTAAATTACTGGACAATTACCTCGCTGAAGTAGCGCTAGACTCAAACTTGTTGCCATCAAAATTCATAGCACTTGCAGAGCTACTCCCAGATCATGCACGTATTGTGAGTGATGGACTCTATCGAGCCGTTGATATCTTCCTTAAGGTTCATCCAAACGTGAAGGAGACAGACAGGTACAGGCTGTGCAAAACCATTGATTGTCAGAAACTGTCTCAAGAAGCATGCAGTCATGCAGCTCAGAATGAAAGGCTACCAGTGCAAATGGCAGTTCAAGTTCTTTACTTTGAGCAAATAAGGCTTCGCAATGCCATGAATGGAGGGCACAACCAATTCTTCTTTGGTCAATTCCCTCAACGTTCTGGCAGTGGCGCAGGGAGTGGAGCCATTTCCCCTAGAGATAACTATGCATCAGTGAGAAGAGAGAACCGAGAGCTGAAGCTTGAAGTTGCAAGAATGAGAATGAGGCTCACTGATTTGGAGAAAGACCATGTTTCTATGAAGCAGGAGCTTGTTAAGTCTCACCCTGCCAACAAGCTCTTCAAATCATTCACCAAAAAACTAAGCAAACTCAATACCCTATTTCGGATAAATAGTATTAAGCCAACTGGGGGCAAAGCTAGTTCTGAAACTCGCTTCCCTTTTCCAAAGCGAAGGCGCCACTCAGTTTCATGA 1887 0.4187 MGVVTVGELKPSVSGKRTFRPSSSIRQTAEWPISDVSSDLTIEVGTSTFALHKFPLVSRSGRIRKLVLEAKDSKVSRVSLPSVPGGAEAFELAAKFCYGINVDFTLSNVALLRCTAHFLEMTEELAEKNLESRAESYLRDTVLPNIPNTIHVLHCCETLLPMSEEINLVNKLIIAIANNACKEQLTSGLLKLDHTFPSKSIPTMEPETPSDWWGKSFNVLSLEFFQRVVSVVKSKGLKQDMISKILMNYAHSSLQGIGVRDPQVVKGSLIDMEQQKKQRIIVETIVGLLPTQSRKSPVPMAFLSSLLKAAIATSASTPCKSDLERRIGLQLDQAILEDILIPTNSPPNTLVTMYDTDSVLRIFSIFLNLDEEDGEDSDNFVDESQMVYDFDSPGSPKQSSILKVSKLLDNYLAEVALDSNLLPSKFIALAELLPDHARIVSDGLYRAVDIFLKVHPNVKETDRYRLCKTIDCQKLSQEACSHAAQNERLPVQMAVQVLYFEQIRLRNAMNGGHNQFFFGQFPQRSGSGAGSGAISPRDNYASVRRENRELKLEVARMRMRLTDLEKDHVSMKQELVKSHPANKLFKSFTKKLSKLNTLFRINSIKPTGGKASSETRFPFPKRRRHSVS* 629
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g0460 628 Coils Coil 540 574 - -
Apr4g0460 628 Pfam NPH3 family 211 480 IPR027356 -
Apr4g0460 628 ProSiteProfiles NPH3 domain profile. 211 504 IPR027356 -
Apr4g0460 628 PANTHER BTB/POZ DOMAIN-CONTAINING PROTEIN SETH6 25 621 - -
Apr4g0460 628 PANTHER OS12G0117600 PROTEIN 25 621 IPR043454 -
Apr4g0460 628 Pfam BTB/POZ domain 37 123 IPR000210 GO:0005515
Apr4g0460 628 MobiDBLite consensus disorder prediction 605 628 - -
Apr4g0460 628 SUPERFAMILY POZ domain 22 123 IPR011333 -
Apr4g0460 628 Gene3D Potassium Channel Kv1.1; Chain A 21 134 IPR011333 -
Apr4g0460 628 ProSiteProfiles BTB domain profile. 38 106 IPR000210 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g0460 Apr-Chr4 3863901 3867610 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g0460 1 454 EF-hand Containing Proteins AT2G47860 60.663 0.0 550
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g0460 - - gmx:100776688 1097.42
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g0460 4 3863901 3867610 Apr8g0163 8 1246968 1251120 PCT