Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g0112 ATGACTCTCTTTCTCTCCTTTACCACTGTGCTTTTCCTGCTTTCTTTTTTCTCTACCATTCTTCTTCTACACTGTGACGCTTTCCCAGTTCATTACAGTCACCCTTTACACCATCGCCACCCTCACTTTGCCACTCATAACTACAGAGATGCTCTCACCAAATCTATTATGTTCTTTGAAGGCCAGAGGTCAGGGAAGCTCCCTTCTAACCAGAGAATGTCTTGGAGGAGAGACTCTGGTCTCTCTGATGGCTCAGCCATGCACGTTGATTTGGTTGGAGGGTACTATGATGCTGGGGACAATGTCAAGTTTGGATTTCCCATGGCCTTTACCACCACCATGCTTTCATGGAGTGTTATTGAGTTTGGTGGGCTAATGAAAGGCGAGTTGCAGAATGCCAGAGAGGCCATTCGATGGGGTACTGATTATCTTCTCAAAGCCACTGTGCATCCAAACACTATTTATGTTCAGGTGGGAGATGCTAAGAAGGACCACGCTTGTTGGGAGAGACCCGAGGACATGGACACTCCAAGAAGCGTGTTTAAGATTGATGCAAACACACCTGGTTCTGAAGTTGCTGCGGAAACTGCTGCAGCTCTTGCAGCTGCTTCTCTGGTTTTCAGAAAAAGTGACCCCACATACTCCAAAATTTTAGTCAGAAGGGCTATGAGGGTCTTCCAGTTTGCAGATAGATACAGGGGATCCTACAGCAATGCCTTGAAGCCCTTTGTGTGCCCCTTCTATTGCTCTTACTCTGGCTATCAGGATGAGCTGTTGTGGGGTGCTGCTTGGCTGCACAAGGCTACCAAGTATCCAATGTACCTAAATTATATCAAAGTTAATGGCCAACTCCTTGGGGCTGCAGACTCTGACAACACCTTTGGGTGGGATAACAAGCATGTTGGAGCAAGGATACTTCTTTCCAAGGAATTCCTTGTGCAAAAGGTACAATCCCTCCATGACTACAAGGGCCATGCGGACAATTTTATCTGTTCTCTAATTCCTGGGGCATCTTTCTCTTCTGCCCAATACACCCCAGGTGGGCTTCTATTCAAGATGGGTGATAGTAACATGCAGTATGTCACATCCACCTCCTTCCTACTGTTAGCATATGCCAAATACTTAACCTCGGCCCATATGGTTGTTAACTGTGCTGGAACCACAGTGACCCCAAAGAGGCTCCGGACAATAGCCAAGAAACAGGTGGATTACTTGCTTGGGGACAACCCTTTGAAGATGTCGTACATGGTGGGGTATGGTCCAAGGTTCCCACGAAGGATTCACCACAGGGGCTCATCTCTTCCATCCATTGCTGTGCACCCGGGCAAGATCCAGTGTTCAGCAGGGTTCAGTGTGATGAATTCACAATCTCCTAACCCCAACATTCTAGTGGGTGCCGTTGTTGGTGGACCTGACCTGCATGATGGGTTCCCAGATGAACGATCAGATTATGAGCAATCAGAGCCAGCTACTTATATTAACTCACCTCTTGTAGGAGCACTTGCTTATCTTGCACACTCATTTGGACAACTCTAG 1536 0.4733 MTLFLSFTTVLFLLSFFSTILLLHCDAFPVHYSHPLHHRHPHFATHNYRDALTKSIMFFEGQRSGKLPSNQRMSWRRDSGLSDGSAMHVDLVGGYYDAGDNVKFGFPMAFTTTMLSWSVIEFGGLMKGELQNAREAIRWGTDYLLKATVHPNTIYVQVGDAKKDHACWERPEDMDTPRSVFKIDANTPGSEVAAETAAALAAASLVFRKSDPTYSKILVRRAMRVFQFADRYRGSYSNALKPFVCPFYCSYSGYQDELLWGAAWLHKATKYPMYLNYIKVNGQLLGAADSDNTFGWDNKHVGARILLSKEFLVQKVQSLHDYKGHADNFICSLIPGASFSSAQYTPGGLLFKMGDSNMQYVTSTSFLLLAYAKYLTSAHMVVNCAGTTVTPKRLRTIAKKQVDYLLGDNPLKMSYMVGYGPRFPRRIHHRGSSLPSIAVHPGKIQCSAGFSVMNSQSPNPNILVGAVVGGPDLHDGFPDERSDYEQSEPATYINSPLVGALAYLAHSFGQL* 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g0112 511 ProSitePatterns Glycosyl hydrolases family 9 (GH9) active site signature 2. 404 430 IPR018221 -
Apr8g0112 511 ProSitePatterns Glycosyl hydrolases family 9 (GH9) active site signature 3. 477 495 IPR033126 -
Apr8g0112 511 Gene3D - 44 511 IPR012341 GO:0005975
Apr8g0112 511 PANTHER ENDOGLUCANASE 17 10 511 - -
Apr8g0112 511 PANTHER ENDO-1,4-BETA-GLUCANASE 10 511 - -
Apr8g0112 511 SUPERFAMILY Six-hairpin glycosidases 45 509 IPR008928 GO:0005975
Apr8g0112 511 Pfam Glycosyl hydrolase family 9 48 501 IPR001701 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g0112 Apr-Chr8 900725 903121 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g0112 1 507 Glycoside Hydrolase AT1G02800 75.000 0.0 768
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g0112 K01179 - gmx:100777718 924.465
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr8g0112 8 900725 903121 Apr8g0112 8 900725 903121 ECH
Apr4g0506 4 4215830 4217942 Apr8g0112 8 900725 903121 PCT