Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g0085 ATGGAAACTATGTGTTTAAAAAGTGGGATAGTTCCCACGATCCCTATCAGTGGATCTCTGGACGCACGTGCGAATCCTTCTCAAGTGAGCACGGTGGGGCGTTCCGTGGCGGAGAAACCGCCGCAGAAGTCGGTGTTTTCGAGATTTTCTTTTAGATATCCTTTGGAATCTCTCTGGCCTCGGGGAGCTGGGAATAGCAGATACAAAGGGCTGGCCCTTGACGACGCCGTTTTGGTTGAGAACGGCGAAGGGAAGGCCGTTAGAGATGACGGAGAGGGTGACGGAATGGAACAGCAGAGAGGAAACTGGGTTTTGAAGATTTTGCATGTGAGGTCTACGTGGAAGGGGAAGCAGGGAAACAAAGAGGATGTTGCGGCTAATGATGAATTTCATGAAACGAATGAGGATGAAGAGGAGGCGTGTGATGGTTGCAGGGTTGATGAAGATGAAGGTGACTGTGGCAAAGAAGAGGTTCAATTCGATAGAGACTCGTTTTCCAGAATGCTACGGAGGGTGTCTTTAGCTGAAGCAAGACTGTATGCTCAGATGTCACACTTGGGGAACTTGGCTTATTCTATACCCAAAATCAATCCAGGGAAACTCTTAAAACATTATGGTCTGCGTTTTGTGACTTCATCAATAGAGAAGAAGGAATTGGCAGCAACAGCTGAAAAAAATCCCCATAAAGTTGAAAATGATGAGAAGGAAGAAGAAGAAAGAGAGGAGCCGAAGAACAGTGGATACAAGATAAGTGCAAATGCTGCTTATAATATTGCTGCGTCTGCTGCCTCTTATCTGCATACTCAGACGAGGAGCATACTTCCATTCAAATCCTCAAATGCCACAGCTGGTGAAGCTTCGCATGAAGGAAGCAATGAGAGCCCTGACAGTGCTAACATGATAAACACAGAGGTGGCATCTTTGATGGCGACTACTGACTCGGTGACAGCAGTGGTTGCAGCAAAGGAGGAAGTAAAGCAGGCTGTTGCAGATGATCTAAACTCTGCACATTCAACACCCTGCGAATGGTTTGTCTGTGATGATGACCAGAGTGGTACTAGATTTTTTGTTATTCAGGGTTCTGAGACACTGGCTTCATGGCAAGCAAACCTACTTTTTGAGCCGATTAAATTTGAGGATTTGGATGTCCTTGTGCACAGAGGTATATACGAGGCTGCTAAAGGGATATATCAACAGATGTTGCCAGAAGTTCATGCTCACCTAAAATCTCGAGGTTCCCGTGCGACTTTCCGATTCACCGGGCATTCTCTTGGTGGAAGCTTGGCATTACTTGTAAATCTCATGCTGTTAATAAGGCACGAAGTGCCAATCTCCTCTCTACTTCCTGTGGTAACATTCGGTTCCCCATCCATCATGTGTGGAGGTGATAGTCTGCTAGAAAAGCTTGGCTTGCCTCGGAGTCATGTTCAGGCAATCACAATGCACAGAGACATTGTACCACGAGCATTTTCGTGTAATTATCCTAACCATGTCGCAGAACTATTGAAGGCTGTCAATGGGAACTTCCGTAATCATCCTTGTCTCAGTAACCAGAAGCTACTATATGCACCAATGGGTAATCTGCTGATTCTACAGCCAGATGAGAAATTTTCACCTAGCCATCATCTCTTGCCATCAGGGAGTGGTCTATATCTTTTGTGTGGTCCTTTGTCAGAATCAAATGACACAGACAAGCAGCTCCGAGCTGCTCAGATGGGCTTCTTGAACTCACCCCATCCACTTGAGATATTAAGTGACCGGTCTTCTTATGGATCTGGAGGAAGTATACAAAGAGATCATGACATGAATTCCTACTTAAGGTCTGTGAGAACTGTGATTCGCCAAGAACTAAACCAGATCCGTAAAACAAAGAGAGAGCAACGGCGCAAGGTGTGGTGGCCTCTTGTATTACCACGTGGAATTGATGCCAGCATTGTTGTTGGGAGGTCCATGATATCGGTCAATATGGGTCAACGCCAGTCCCCCTTCTCTGGCATGATACAAACGGGGAGAGAGTCCTTGAAAAGGTTCAGTAGGCTTGTTGCATCCCAACATATGCATTTGTTTGTGTTGCTCTTATTCCCTGCTAGATTGTTATTCTTGGGGACATACAGCGTAATTAACCTCAATTGA 2133 0.4576 METMCLKSGIVPTIPISGSLDARANPSQVSTVGRSVAEKPPQKSVFSRFSFRYPLESLWPRGAGNSRYKGLALDDAVLVENGEGKAVRDDGEGDGMEQQRGNWVLKILHVRSTWKGKQGNKEDVAANDEFHETNEDEEEACDGCRVDEDEGDCGKEEVQFDRDSFSRMLRRVSLAEARLYAQMSHLGNLAYSIPKINPGKLLKHYGLRFVTSSIEKKELAATAEKNPHKVENDEKEEEEREEPKNSGYKISANAAYNIAASAASYLHTQTRSILPFKSSNATAGEASHEGSNESPDSANMINTEVASLMATTDSVTAVVAAKEEVKQAVADDLNSAHSTPCEWFVCDDDQSGTRFFVIQGSETLASWQANLLFEPIKFEDLDVLVHRGIYEAAKGIYQQMLPEVHAHLKSRGSRATFRFTGHSLGGSLALLVNLMLLIRHEVPISSLLPVVTFGSPSIMCGGDSLLEKLGLPRSHVQAITMHRDIVPRAFSCNYPNHVAELLKAVNGNFRNHPCLSNQKLLYAPMGNLLILQPDEKFSPSHHLLPSGSGLYLLCGPLSESNDTDKQLRAAQMGFLNSPHPLEILSDRSSYGSGGSIQRDHDMNSYLRSVRTVIRQELNQIRKTKREQRRKVWWPLVLPRGIDASIVVGRSMISVNMGQRQSPFSGMIQTGRESLKRFSRLVASQHMHLFVLLLFPARLLFLGTYSVINLN* 711
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g0085 710 PANTHER PHOSPHOLIPASE A1 PLIP2, CHLOROPLASTIC 34 707 - -
Apr8g0085 710 CDD Lipase_3 339 495 - -
Apr8g0085 710 Gene3D alpha/beta hydrolase 296 523 IPR029058 -
Apr8g0085 710 SUPERFAMILY alpha/beta-Hydrolases 337 523 IPR029058 -
Apr8g0085 710 MobiDBLite consensus disorder prediction 220 246 - -
Apr8g0085 710 Pfam Lipase (class 3) 356 493 IPR002921 GO:0006629
Apr8g0085 710 MobiDBLite consensus disorder prediction 220 248 - -
Apr8g0085 710 PANTHER PHOSPHOLIPASE A1 PLIP2, CHLOROPLASTIC 34 707 IPR043367 GO:0008970
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g0085 Apr-Chr8 705782 709493 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g0085 1 709 Acyl Lipid Metabolism Gene Families AT1G02660 57.182 0.0 749
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g0085 - - gmx:100807834 1135.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr8g0085 8 705782 709493 Apr8g0085 8 705782 709493 ECH
Apr4g0528 4 4386262 4389268 Apr8g0085 8 705782 709493 PCT