Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g0528 ATGGATACTCTGTTATTAAGAAGTAGCATTTCCATTCCCATTGCTGTAACTGCACGCGCCAATGATTACGCGTCACAGTCTCAGGTTAGCACGGTGGGGTTCTCCTCCGTGTTTTCTAGATTCTCCTTTAGACACCCTTTGAAGTCGCTGTGGCCACAGCCGAGTGGCAAGGCCGCCGGCTACAAAGGGCTCGCCGTCGACGACGCCGTTTTGGCGGAGAATGGAACGGCGGAGCTTGAAGGAGAAGGAGAGCGTCAAAACGGAAACTGGGTTTTCAAGATTTTTCATGTCAGGTCTGTTTGGAATGGGGAGCGAAGGAGCGATGCAAACGATGAAGATGAAGTTGTGGCGAATGATGGAACGAATGAAGAGGAGTGTGATGGTTGTAAGGTCGATGATGATGATGAGGATGAGGATGAAGAAGAGGTTGAATTCGATAGAGACTCGTTTTCGAGAATGCTACGGAGGGTGTCATTGGCCGAAGCTAGATTGTATGCGCACATGTCCCACTTGGGCAACTTGGCATACTCTATTCCAAAAATCGAACCAGGGAAGCTCTTGCAAAACTCTGGTCTACGTTTTGTAACTTCATCCATAGAAAAGAAGGAACTAGCTGTGGCAGCTGAAAAAAATCAGGCATGTGGTGGAACTCAGAAAGAAGGATGTAATGAAAAGGATGTGGGAGAAAGAAAAGAGCAAAAGAATGGTGTATGCAAAATAAGTGCATCTGCTGCATATGGGATTGCTGCTTCTGCTGCCTCTTATCTTCATGCTCAGACAAGGAGCATACTTCCATTCAAATCTTCTGATGATGGGGTCAGTGAAGCTTCACATGAAGCAAGCAATGAAAGCTGTGACAGTGACAGCAAGAGGAACACTGAGGTGGCAGCTTTGAGAGCAACTACTGATTCTATGACAGCAGTGGTTGCTGCAAATGAGGATGTCAAGCAGGCTTTTGTGGATGATTTGAACTCAACAAGATCTTCACCCTGTGAATGGTTCGTATGTGATGATGACCAGACCTCTACAAGATATTTTGTTATTCAGGGCTCTGAGTCGTTTGCATCCTGGCAAGCAAACCTACTATTTGAGCCAGTTCAATTTGAGGGGTTGGATGTACATGTTCATAGAGGTATTTATGAGGCTGCCAAAGGGACATATCAACAGATGTTGCCAGAAATTCGTGCTCACCTAAAATGTCGTGGCTCTCGTGCAACATTTCGTTTTACGGGTCATTCTCTTGGGGGAAGCTTGGCATTACTTGTAAATCTTATGCTGTTGATAAGGAAGGAATTTCCAATGTCCTCTCTGCTTCCTGTAATAACGTTTGGCTCCCCATCCATCATGTGTGGAGGTGATAATCTACTTGACAAACTAGGATTACCACGCAGTCATGTTCAAGCAATCACAATGCACAGAGACATTGTGCCACGAGCATTTTCTTGCAAGTACCCTAACCATGTTGCTGAACTACTAAAGGCTGTTAATGGAAACTTCCGTAGTCATCCATGTCTTAATAACCAGAAGCTATTATATGCACCAATGGGTGAATTGCTGATTCTACAGCCAGATGAGAATTTTTCACCAAGCCATCATCTACTACCTTCAGGCAGTGGTCTATATCTTTTGAGTGGTACTCCTCTCTCAGAATCCAATGACACAGACAAGTTGATCAGAGCAGCACAATTGGTGTTCTTGAACTCACCACACCCACTTGAAATATTAAGTGACCGATCAGCTTATGGATCAGGAGGAACCATACAGAGAGACCATGACATGAATTCATACTTAAAATCTGTGAGAACTGTGATTCGCCAAGAACTTAACCAAATTCGTAAGGCAAAGAGAAAGCAAAGGCGAAAGGCGTGGTGGTCTCTGGTGGCGCCACGTGGAAATCATGAAGGCATTGTTGTTGGGAAGTCCGTTGTATCTGTGAATGTGATTCAAGACCAGCCTCCTTTTTCTGCCATCATACAGACAGGTCGAGAGTCCTTGAAAAGGTTCACTAGTCTTGTGGGCTCTCAACATATGCAATTCTTTGTAGTGCTATTGTTTCCTGCACGTTTGTTACTCTTGGGAGCATGTAACATGATTAGCTTAAGATGA 2106 0.4468 MDTLLLRSSISIPIAVTARANDYASQSQVSTVGFSSVFSRFSFRHPLKSLWPQPSGKAAGYKGLAVDDAVLAENGTAELEGEGERQNGNWVFKIFHVRSVWNGERRSDANDEDEVVANDGTNEEECDGCKVDDDDEDEDEEEVEFDRDSFSRMLRRVSLAEARLYAHMSHLGNLAYSIPKIEPGKLLQNSGLRFVTSSIEKKELAVAAEKNQACGGTQKEGCNEKDVGERKEQKNGVCKISASAAYGIAASAASYLHAQTRSILPFKSSDDGVSEASHEASNESCDSDSKRNTEVAALRATTDSMTAVVAANEDVKQAFVDDLNSTRSSPCEWFVCDDDQTSTRYFVIQGSESFASWQANLLFEPVQFEGLDVHVHRGIYEAAKGTYQQMLPEIRAHLKCRGSRATFRFTGHSLGGSLALLVNLMLLIRKEFPMSSLLPVITFGSPSIMCGGDNLLDKLGLPRSHVQAITMHRDIVPRAFSCKYPNHVAELLKAVNGNFRSHPCLNNQKLLYAPMGELLILQPDENFSPSHHLLPSGSGLYLLSGTPLSESNDTDKLIRAAQLVFLNSPHPLEILSDRSAYGSGGTIQRDHDMNSYLKSVRTVIRQELNQIRKAKRKQRRKAWWSLVAPRGNHEGIVVGKSVVSVNVIQDQPPFSAIIQTGRESLKRFTSLVGSQHMQFFVVLLFPARLLLLGACNMISLR* 702
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g0528 701 MobiDBLite consensus disorder prediction 120 146 - -
Apr4g0528 701 MobiDBLite consensus disorder prediction 269 291 - -
Apr4g0528 701 MobiDBLite consensus disorder prediction 272 291 - -
Apr4g0528 701 CDD Lipase_3 299 478 - -
Apr4g0528 701 PANTHER PHOSPHOLIPASE A1 PLIP2, CHLOROPLASTIC 22 698 - -
Apr4g0528 701 Coils Coil 597 617 - -
Apr4g0528 701 MobiDBLite consensus disorder prediction 120 145 - -
Apr4g0528 701 PANTHER PHOSPHOLIPASE A1 PLIP2, CHLOROPLASTIC 22 698 IPR043367 GO:0008970
Apr4g0528 701 Pfam Lipase (class 3) 346 482 IPR002921 GO:0006629
Apr4g0528 701 Gene3D alpha/beta hydrolase 272 514 IPR029058 -
Apr4g0528 701 SUPERFAMILY alpha/beta-Hydrolases 328 513 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g0528 Apr-Chr4 4386262 4389268 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g0528 41 701 Acyl Lipid Metabolism Gene Families AT1G02660 57.246 0.0 708
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g0528 - - gmx:100788786 947.192
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g0528 4 4386262 4389268 Apr8g0085 8 705782 709493 PCT