Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g0082 ATGGCTGTCACCTCTCCCTCTCTCAATGCTACAGAGAAGAAGTACTGGTGGCTAACCAACCGGAAGATTGTTGAGAAGTACATAAAAGACGCACGTAGCCTCATTGCAACTCACGAACAGAGTGAGATCGCTTCGGCTGTGAATCTTCTAGACGCAGCTTTGGCTATATCTCCACGCCTAGACGAAGCGCTTGAGCTGAGAGCGAGGTCTCTCATCTATTTACGAAGGTTCAAAGACGTGGCTGATATGCTTCAAGACTACATTCCCAGTCTGAGAATAGCGAACGAAGATTCTAACTCTATTTCTTCGGATAACTCGTCTCAGCAGCTTTCAAGGGAGGGTGTAAAGCTTCTATCTTCCGCGGATTCTACGGTTTCAGATCAAAGTTTCAAGTGCTTCTCTATTTCTGATTTGAAGAAGAAACTCATGGCAGGACTGTGTAAAAATTGCGACAAAGAAGGATATTGGAGATACTTGGTTTTGGGGAAAGCATGCTGCCATCTAGGCCTAATGGAAGACGCAATGGTTCTTCTCCAAACCGGAAAACGCCTAGCAAGCGCCGCATTCCGCCGCCAGAGCGTGTGTTGGACTGACGACAGCTTCTCCCTCTCCCTCTCAAACCCACCCTTCTCCGCCGACACCACCCAATCCGAAACCCTCACGCAACTCCTCTCCCACATCAAGCTCCTCCTCCGCCGACGCGCCGCTGCACTCGCAGCCCTCGACGCTGGCCTCCATTCCGAGGCCATCCGCCACTTCTCCAAAATCGTCGACGGCCGCCGCGCCGCCCCTCAAGGCTTCCTCGCCGAATGCTACATGCACAGAGCCTCCGCGTTCCGCTCGGCGGGTCGAATCGCCGATTCAATCGCTGACTGTAACCGCACACTGGCCCTCGACCCCACTTGCATCCAAGCACTCCACACCAGAGCCTCACTCCTCGAAACCATTCGTTGCTTCCCCGATTCCCTTCACGACCTCGAACATCTCAAACTCCTCTACAACACCATCTTACGCGACCGCAAACTAGCCGGTCCCGCTTGGAAGCGCCAGCACGTGCGTTACAGCGAAATCCCCGGTAAACTCTGCGCCCTCACCACCAAGATTCAAGAACTCAAGCAAAGGGTGGCTTCCGGTGACACGGGTAATGTGGATTACCACGCTTTGATCGGGTTGAGACGTGGGTGTTGTCGTTCCGAGTTGCAGAGGGCTCATTTGTTGCTGTGTTTGAAACATAAGCCTGATAAGGCTACGAGCTTCATCGAACGGTGCGAACTCGCGGACGAGCGTGATCTCGAGTCGGTTAAGGAAAGGGCGAAGATGTCGTCGTTGTTGCTGTATAGGTTGGTTCAGAAGGGTTATGCGAACGTGATGGGTAGCGTTATGGAGGAGGAAGCTGCAGAGAAGCAGAGGAAGAAGGCTTTGGAAGATCAAGTGAAGAATAACTGTAAGGTGGAGAATCAGAAATTGGAAAACAAAAAGTGCACGGTGTCGTCTCCTTCGACAGCGAATCCCTCGGTTTTTCAAGGCGTGTTTTGCCGCGATCTTGCGGTGGTTGGGAACTTGCTTTCGCAAGTGGGGTTCAACCGTTCCATGCCGGTCAAGTACGAGGCGTTGAGTTGCTGA 1623 0.5262 MAVTSPSLNATEKKYWWLTNRKIVEKYIKDARSLIATHEQSEIASAVNLLDAALAISPRLDEALELRARSLIYLRRFKDVADMLQDYIPSLRIANEDSNSISSDNSSQQLSREGVKLLSSADSTVSDQSFKCFSISDLKKKLMAGLCKNCDKEGYWRYLVLGKACCHLGLMEDAMVLLQTGKRLASAAFRRQSVCWTDDSFSLSLSNPPFSADTTQSETLTQLLSHIKLLLRRRAAALAALDAGLHSEAIRHFSKIVDGRRAAPQGFLAECYMHRASAFRSAGRIADSIADCNRTLALDPTCIQALHTRASLLETIRCFPDSLHDLEHLKLLYNTILRDRKLAGPAWKRQHVRYSEIPGKLCALTTKIQELKQRVASGDTGNVDYHALIGLRRGCCRSELQRAHLLLCLKHKPDKATSFIERCELADERDLESVKERAKMSSLLLYRLVQKGYANVMGSVMEEEAAEKQRKKALEDQVKNNCKVENQKLENKKCTVSSPSTANPSVFQGVFCRDLAVVGNLLSQVGFNRSMPVKYEALSC* 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g0082 540 Gene3D Tetratricopeptide repeat domain 207 349 IPR011990 GO:0005515
Apr8g0082 540 CDD DnaJ 384 418 IPR001623 -
Apr8g0082 540 PANTHER - 1 540 - -
Apr8g0082 540 PANTHER TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN 1 540 - -
Apr8g0082 540 SUPERFAMILY TPR-like 236 330 IPR011990 GO:0005515
Apr8g0082 540 SMART tpr_5 269 302 IPR019734 GO:0005515
Apr8g0082 540 SMART tpr_5 155 188 IPR019734 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g0082 Apr-Chr8 682558 685385 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g0082 - - gmx:106797171 845.884
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr8g0082 8 682558 685385 Apr8g0082 8 682558 685385 ECH
Apr4g0529 4 4394934 4399230 Apr8g0082 8 682558 685385 PCT