Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g0529 ATGGCCGTCACTACTCACACTCTAAACGCCACAGAAAAAAAACACTGGTGGCTTACCAACCGAAAGATTGTTGAAAAATACATCAAAGATGCTCGTAGTCTTATTGCGACTCAAGAACAGAGCGAGATCGCTTCGGCTCTCAACCTTCTAGACGCGGCTCTAGCCATTTCGCCGCGGCTGGACCAAGCTCTTGAGTTGAGAGCCCGGGCGCTACTCTATTTGCGCCGATTCAAAGATGTAGCTGATATGCTTCAAGACTACATTCCGAGCCTGAGAATGGCGAGCGATGATTCTTCCTCTGTTTCTTCTGATACCTCTTCTCAGCAGCTTTCGAGGGAGGGAGTGAAGCTTCTCTCGTCGGATTCACCGGTTGGGGATCAGAGTTTTAAGTGCTTCTCTGTGTCTGACCTGAAGAAGAAGGTGATGGCAGGGCTGTGTAAAAGTTGCGCGAAGGAAGGGCAATGGAGATACTTGGTATTGGGGGAAGCATGTTGCCATTTGGGCCTAATGGAGGATGCAATGGTTCTTCTCCAAACTGGAAAACGACTTGCCAGTGCAGCGTTCAGGCGCGAGAGTGTGTGTTGGTCAGAAGACAGCTTTTGCATCTCAAGCATTCCCTTCGCCGGAGACCCCACAAACGCACCACCCACAACTCCACCGCGAACCCCTCTCACTGACTCAGAGAGCGTGACCCAACTCCTCAGCCACATAAAATTCCTTCTCCGTCGACGCGCCGCTGCACTCGCCGCCCTTGACGCCGGCCTCTACTCAGAGGCCATCCGCCACTTCTCCAAAATCGTCGACGGCCGCCGGAACGCCCCACAGAGCTTCCTGGCCGAATGCTACATGCACAGAGCCTCTGCACACCGTTCCGTGGGTCGAATCGCCGAGTCGATCGCGGATTGTAACCGCACCCTCGCCCTGGACCCCACCTGCATTCAAGCCCTCGACACAAGAGCTTCACTCTTCGAAACCATTCGATGCTTACCCGATTCTCTCCACGACCTCGAACACCTGAAGCTACTCTACAATTCAATCCTTCGTGATCGCAAGCTTCCTGGGCCTGCATGGAAGCGCCACAACGTGCGCTATAGAGAGATTCCAGGGAAACTTTGTGCCCTCACCACCAAAATTCAAGAACTAAAGCAAAGACTTGCCTCAGGGGAAACGGGTAACGTTGATTACTATGCTTTGATTGGCGTGCGAAGAGGGTGTTCACGATCAGAGTTGGAGAGAGCCCACGTATTGCTTTGCTTGCGGCACAAGCCTGATAAGGCCACGAATTTCATTGAACGGTGTGAGCTTGCGAATGAACGCGATGTTGATTCGGTTAAGGAGAAAGCCAAGATGTCAGCGTTGTTGCTGTTTAGATTGGTTCAGAAGGGTTACACGAGTGTGATGAGTACTATAATGGATGAAGAAGCTGCAGAGAAGCAGAGGAAGAAGGCTGCTTTACAAGCGCTTCAAGTACACAAAGTTACTGAACAACCTGAGCTGAATCCGAATAATAAACCAGAAGATAATAGTAGGAGCAGCGTAGAAAATAAGGCTCTGATAGCTTCTTCTACTGTGAATCCGGCAGTGTTTCAGGGTGTTTTTTGCCGCGATCTTGCGGTGGTTGGGAACTTGCTTTCTCAGGTGGGATTTAATCGACCCATTCCGGTGAAGTATGAAGCGTTGAGTTGTTGA 1689 0.5098 MAVTTHTLNATEKKHWWLTNRKIVEKYIKDARSLIATQEQSEIASALNLLDAALAISPRLDQALELRARALLYLRRFKDVADMLQDYIPSLRMASDDSSSVSSDTSSQQLSREGVKLLSSDSPVGDQSFKCFSVSDLKKKVMAGLCKSCAKEGQWRYLVLGEACCHLGLMEDAMVLLQTGKRLASAAFRRESVCWSEDSFCISSIPFAGDPTNAPPTTPPRTPLTDSESVTQLLSHIKFLLRRRAAALAALDAGLYSEAIRHFSKIVDGRRNAPQSFLAECYMHRASAHRSVGRIAESIADCNRTLALDPTCIQALDTRASLFETIRCLPDSLHDLEHLKLLYNSILRDRKLPGPAWKRHNVRYREIPGKLCALTTKIQELKQRLASGETGNVDYYALIGVRRGCSRSELERAHVLLCLRHKPDKATNFIERCELANERDVDSVKEKAKMSALLLFRLVQKGYTSVMSTIMDEEAAEKQRKKAALQALQVHKVTEQPELNPNNKPEDNSRSSVENKALIASSTVNPAVFQGVFCRDLAVVGNLLSQVGFNRPIPVKYEALSC* 563
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g0529 562 MobiDBLite consensus disorder prediction 493 513 - -
Apr4g0529 562 PANTHER - 1 562 - -
Apr4g0529 562 CDD DnaJ 394 428 IPR001623 -
Apr4g0529 562 SUPERFAMILY TPR-like 245 340 IPR011990 GO:0005515
Apr4g0529 562 MobiDBLite consensus disorder prediction 492 513 - -
Apr4g0529 562 Gene3D Tetratricopeptide repeat domain 214 352 IPR011990 GO:0005515
Apr4g0529 562 PANTHER TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN 1 562 - -
Apr4g0529 562 SUPERFAMILY Chaperone J-domain 390 428 IPR036869 -
Apr4g0529 562 Gene3D DnaJ domain 379 499 IPR036869 -
Apr4g0529 562 SMART dnaj_3 393 475 IPR001623 -
Apr4g0529 562 SMART tpr_5 279 312 IPR019734 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g0529 Apr-Chr4 4394934 4399230 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g0529 - - gmx:100808420 901.738
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g0529 4 4394934 4399230 Apr8g0082 8 682558 685385 PCT