Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g0073 ATGGGGGCAGATGAAGCACCATTGGACGACAAAGCAAAGAGGATGAGAGATCTTCTATCAAGCTTCTACTCCCCAGACCCTTCCATGTCCAACTCCGCCAACACCTCCAAACTCGCTTCCCTCGATGACATCAATTCTACCTCCTTCGATCCCGATCAGTACATGAATATCCTGGTACACAAGTCCAATTTAGAAGGACTACTTCAACGGCACGTTGAAATGGCGGCTGAAATCAAGAATCTCGACACTGACTTGCAAATGCTGGTCTACGAGAATTACAATAAGTTCATCAGCGCTACGGATACTATAAAAAGGATGAAAAGTAACATTTCAGGGATGGAGACTAATATGGAACAGCTTCTCGAGAAGATAATGTCCGTGCAATCAAGAAGTGACAATGTCAACACTTCTCTATTTGACAAAAGGGAGCATATTGAGAAACTGCATCGGACTTGCAATCTTCTTCGAAAAGTTCAGTTCATATACGATCTACCTGATAGACTTAGCAAGTGCATCAAATCAGAGGCCTATGCAGATGCAGTCAGGTTTTACACAGGAGCAATGCCAATTTTTAAGGCATATGGAGATTCGTCATTCAGGGATTGTAAGCAAGCATCTGAAGAAGCAATAGCTATCATAGTAAAAAACTTGCAGGGGAAGCTATTTTCAGATTCTGAATCAATCCAAGTGAGAGCTGAGGCTGCAGTGCTTCTTAAGCAGTTGAATTTTCCGGTAAACAATTTGAAGGCTAAGCTATTTGAGAAGTTAGAACAATCTATTACAGACATTCAGCTGAACCCTGAAGAAATAAACAATGCTTCAGGCGCCCATTCTTCTCATGAGGCAGCTATTCATGAATTTGTGGAGGCAATTCGTGCTTTTCGAGTCATTTTTCCTGATTCAGAAGAGCAGTTGGTTAAACTTGCTCAGGACTTGGTTACCAAAAACTTTGTAATTACTGAGGAATATGTGAAGACACGGATTTGCCCAGAAGATCTACTTGGTGTTCTTCGAGTTATCTGGGATGATGTGCTCTTGATAGATGAAGTCTTACAGGAAGCAGCTCTCTCGAACCATTCTCTTGAGGCTGCAAAAGTTGTTGTCGCGTTGTATATTAGAAGCACATTTTCTCATCTTCTGCAAGACATCTCCGATTCCCTGTTTCAAATCCTGAAAAAGGATGGAGCGGAGAAGTACTCTCTTGATGTTGTTCTTGATTCTAGCACAAAAGCAGTTCTCCAAGGAGGCACAAATGTCTTGCTGGACTTCCGTAAAATTTTAGATGATGACTCTGGGATCCTAGTTAGACTAAGAGAGTTAATCATTGATTGGGTTCAAGAAGGACTTCAAGACTTTTTTAGGCAACTTGAGGATCAGTTCACTCTGTTTGCAGGAAGAAATAATTCAGCTATTCAAGTACAAGGGTTGGCAGAGGGAGCTCAAGGTGACAAAGCTTTTGCTGGCCTTGTCCTAGTGCTGGCACAATTGTCTGCTTTCATTGAACAAACTGTCATCCCAAAAATCACCGAGGAAATAGCTGCTTCTTTTTCTGGTGGTAGTGTTAGAGGCTATGAATCTGGACCTGCCTTTGTTCCTGGAGAAAGCTGTCGAAGATTTCGGTCAGCTGGTGAAAAATTCCTGCACCTGTACGTGAATTTGAAAACTCAGAGGGCATCACTTCTCCTGAAGAAAAGGTTTACCACACCTAATTGGGTCAAGCATAAGGAGCCAAGAGAAGTTCATATGTTTGTTGATTTATTTCTTCAAGAGCTTGAAGTTATCATTAACGAAGTGAAGCAGATTTTGCCTCAAGGTAGACGTAAGCATCACAGGACTGATAGTAATGGAAGTAGTGCTTCATCAAGGAGCAACCCTTTAAGGGAGGAGAAACTGGGTAGGTCAAATACTCAGAGGGCTAGGAGCCAGCTTTTGGAAACACATCTAGCAAAACTGTTTAAGCAAAAAGTTGAAATTTTCACAAAAGTAGAATATACACAGGAGTCTGTCGTTACAACTTTAGTTAAATTGTGCCTTAAAAGTTTGCAAGAATTTGTCCGACTTCAGACTTTTAACCGAAGTGGATTCCAGCAAATTCAGTTGGATATCCAGTTCTTAAGAACCCCATTAAGGGAAATAGTTGAAGATGAAGCTGCAATCGACTTCTTGCTAGATGAGGTGATTGTTGCTACTGCTGAGAGGTGTCTTGATCCAATTCCACTGGAGCCTCCCATATTGGACAAACTTATACAAGCAAAGTTGGCTAAAACCAAGGAACAAAATACAATCTCGTCATAA 2295 0.4139 MGADEAPLDDKAKRMRDLLSSFYSPDPSMSNSANTSKLASLDDINSTSFDPDQYMNILVHKSNLEGLLQRHVEMAAEIKNLDTDLQMLVYENYNKFISATDTIKRMKSNISGMETNMEQLLEKIMSVQSRSDNVNTSLFDKREHIEKLHRTCNLLRKVQFIYDLPDRLSKCIKSEAYADAVRFYTGAMPIFKAYGDSSFRDCKQASEEAIAIIVKNLQGKLFSDSESIQVRAEAAVLLKQLNFPVNNLKAKLFEKLEQSITDIQLNPEEINNASGAHSSHEAAIHEFVEAIRAFRVIFPDSEEQLVKLAQDLVTKNFVITEEYVKTRICPEDLLGVLRVIWDDVLLIDEVLQEAALSNHSLEAAKVVVALYIRSTFSHLLQDISDSLFQILKKDGAEKYSLDVVLDSSTKAVLQGGTNVLLDFRKILDDDSGILVRLRELIIDWVQEGLQDFFRQLEDQFTLFAGRNNSAIQVQGLAEGAQGDKAFAGLVLVLAQLSAFIEQTVIPKITEEIAASFSGGSVRGYESGPAFVPGESCRRFRSAGEKFLHLYVNLKTQRASLLLKKRFTTPNWVKHKEPREVHMFVDLFLQELEVIINEVKQILPQGRRKHHRTDSNGSSASSRSNPLREEKLGRSNTQRARSQLLETHLAKLFKQKVEIFTKVEYTQESVVTTLVKLCLKSLQEFVRLQTFNRSGFQQIQLDIQFLRTPLREIVEDEAAIDFLLDEVIVATAERCLDPIPLEPPILDKLIQAKLAKTKEQNTISS* 765
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g0073 764 PANTHER UNCHARACTERIZED 1 725 IPR014812 -
Apr8g0073 764 Coils Coil 103 130 - -
Apr8g0073 764 MobiDBLite consensus disorder prediction 604 638 - -
Apr8g0073 764 PANTHER LOW QUALITY PROTEIN: VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 51 HOMOLOG 1 725 - -
Apr8g0073 764 Pfam Vps51/Vps67 44 129 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g0073 Apr-Chr8 601560 612491 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g0073 K20296 - gmx:100818891 1335.09
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr8g0073 8 601560 612491 Apr8g0073 8 601560 612491 ECH
Apr4g0538 4 4476428 4484023 Apr8g0073 8 601560 612491 PCT