Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g0538 ATGGAAAGAACGGACGCGAACGACACGCCGTTGGATGACAAAGCAAGGAGAATGAGAGATCTGCTATCCAGTTTCTACTCTCCAATCCCTTCACCGTCTTCCAATTCCGCTAATGCATTTTCCAAACACGCCTCACCCGACGACATCAATTCCCCTTCATTCCAACCCCATCTCCACATGAACGCCCTGGCACGCAAGTCGAATTTGGAAGGGCTACTACAGAGACACGTTGAAATGGTAGCTGAAATAAAGAATCTCGACACTGACCTGCAAATGCTCGTCTACGAGAATTATAACAAGTTCATCTGCGCCACAGATACTATAAAGAGGATGAAGAGTAATATTTTGGGGATGGAAGCAAATATGGAACAGCTTCTAGAGAAGATAATGTCTGTGCAGTCAAGGAGTGACAGCGTCAACACTTCTTTATGTGAGAATAGGGAGCATATAGAGAAATTGCATCGGACACGCAATCTTCTTCGTAAGATTCAGTTCATATATGATCTACCTGATAGACTAGGCAAGTGCATCAAGTCTGAGGCCTATGCAGATGCAGTCAGGTTCTACACTGGTGCAATGCCAATTTTTAAGACATATGGAGATTCATCATTCCTAGATTGTAAGCGAGCATCTGAAGAAGCAATAGCTATTATAGTAAAAAACTTGCAGGGAAAGCTATTTTCAGATTCTGAATCAATGCAAGTGAGAGCTGAGGCTGCAGTACTCCTTAAGCAGTTGAATTTCCCGGTGGACAATTTGAAAGCAAAGCTACTCGGGAAGTTGGAGCTTTCCCTTACTGACATTCAGTTTATCCCTGAAATAATAGAGAGTGTTTCATCCTCTGCTCATGAGGCAGCCGTTCATGAGTTCGTGGGGGCCATTCGTGCATTTCGAGTAATATTTCCGGATTCAGAAAAGCAATTAGTTAAACTTGCTCAAGATTTAATCACCAAACACTTTCTAAGAATTGAGGAGTATGTAAAGACACGAATTGGTGCTGCAGATCTACTTGGGGTTCTTCGAGTTATCTGGAATGACGTGCTCCGGATGGATGAAGTCTTACAGGAAACTTCTCTCTCTAATCATTCTCTTGAGTCTGCCAAGGTTGCTGTCAAGCTGTATATTACAAGTGCATTTTCTCATCTAATGCAAGACATCTCAGATTCCCTCTTAAAAGTACTGAAACGGGAGGGAGCAGAGGAGCACTCACTAGAAGTTGCTCTTGATACTAGCATAAAAGCGATTTTCCACGGAGGCGGGAACATTTTGCTGGATATCCACAAAATTCTAGATGACGACTTGGAGATTGTAGATAAACTAAGAGACTTAATAATTGAATGGGTTCAAGAAGGATTTCAAGACTTTTTTGGGCAACTTGAGGTTCAGTTCCTATTGTTTTCAGGAACAAACAATTCTTCAGTTACTCAAATTCATCGTTTGACAGAGGGAGCCCTAGGTGACAAAGCCTTTCCTAGTCTTATCTTAGTGATGGCACAATTGTCCGCTTTCATTGGACAGACTGCCATCCCAAAAATCACTGAGGAATTAGCAGATTCCTTTTCTGGTTGTAATGTTGGAGGTTATGACTACGGACTGAGCTTTGTTCAGATCTGTCAGAAATTTAGGATAACCGGTGAAAAATTCTTGCACATGTACATAAATATCAGATCTCAGCGAATATCACTTCTCCTACAGAAGAGGTTTGCCACACCTAATTGGATTAAGCATAAGGAGCCAAGAGAAGTTCATATGTTTGTTGATTTATTTCTTCGGGAGCTCAAAGTTACAGGCAATGAAGTGAAGCAAATTTTGCCTCAAGATATACGAAAGCACCATAGGGCTAATAGTAATGGAAGTACTGCTTCATCGAGAAGTAACTCCTTCCGAGAGGAGAAGTCAAGTCGGTCTAATATTCAGAAGGCAAGGAGCCATCAACTTTTGGAAACACATCTGGCGAAACTGTTTAAGCAAAAGGTTGAAATTTTCTCCAAAGTAGAATATACGCAGGAATCAGTGGTTATGACCATTGTTAAATTGTGCCTTAAAAGCTTACAAGAATTTGTTCGGCTCCAAACTTTTAACCGGAGTGGATTCCAGCAAATTCAGTTGGATGTTCAGTTCATAAGGACTCCATTAAAAGAAATAGTTGAAGACGAGGCCGCAATGGACTTCTTGCTTGATGAGGTTATTGTTGCTGCTGTAGAGCGATGCCTTGATCCAATTCCATTGGAGCCCCCCATATTGGACATACTTATACAAGCAAAGCTGACAAAAAATAGGGAACAGATTATAATCTCTTCATAA 2304 0.4132 MERTDANDTPLDDKARRMRDLLSSFYSPIPSPSSNSANAFSKHASPDDINSPSFQPHLHMNALARKSNLEGLLQRHVEMVAEIKNLDTDLQMLVYENYNKFICATDTIKRMKSNILGMEANMEQLLEKIMSVQSRSDSVNTSLCENREHIEKLHRTRNLLRKIQFIYDLPDRLGKCIKSEAYADAVRFYTGAMPIFKTYGDSSFLDCKRASEEAIAIIVKNLQGKLFSDSESMQVRAEAAVLLKQLNFPVDNLKAKLLGKLELSLTDIQFIPEIIESVSSSAHEAAVHEFVGAIRAFRVIFPDSEKQLVKLAQDLITKHFLRIEEYVKTRIGAADLLGVLRVIWNDVLRMDEVLQETSLSNHSLESAKVAVKLYITSAFSHLMQDISDSLLKVLKREGAEEHSLEVALDTSIKAIFHGGGNILLDIHKILDDDLEIVDKLRDLIIEWVQEGFQDFFGQLEVQFLLFSGTNNSSVTQIHRLTEGALGDKAFPSLILVMAQLSAFIGQTAIPKITEELADSFSGCNVGGYDYGLSFVQICQKFRITGEKFLHMYINIRSQRISLLLQKRFATPNWIKHKEPREVHMFVDLFLRELKVTGNEVKQILPQDIRKHHRANSNGSTASSRSNSFREEKSSRSNIQKARSHQLLETHLAKLFKQKVEIFSKVEYTQESVVMTIVKLCLKSLQEFVRLQTFNRSGFQQIQLDVQFIRTPLKEIVEDEAAMDFLLDEVIVAAVERCLDPIPLEPPILDILIQAKLTKNREQIIISS* 768
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g0538 767 MobiDBLite consensus disorder prediction 24 55 - -
Apr4g0538 767 MobiDBLite consensus disorder prediction 606 636 - -
Apr4g0538 767 PANTHER UNCHARACTERIZED 7 728 IPR014812 -
Apr4g0538 767 Coils Coil 108 135 - -
Apr4g0538 767 MobiDBLite consensus disorder prediction 26 55 - -
Apr4g0538 767 PANTHER LOW QUALITY PROTEIN: VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 51 HOMOLOG 7 728 - -
Apr4g0538 767 Pfam Vps51/Vps67 49 134 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g0538 Apr-Chr4 4476428 4484023 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g0538 K20296 - gmx:100818891 1061.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g0538 4 4476428 4484023 Apr8g0073 8 601560 612491 PCT