Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g1112 ATGGCGTTTTTCCATAGATGGTGGGTGGAACAAAGTCCAGAAACACAAGAACAAGTGAGAAAGCTTGTTGATGCTGGGCAACTAGAATTTGTAAATGGTGGTTGGTGCATGCATGACGAAGCCACGACCCATTACATAGACATGATTGATCAAACCACTTTGGGTCACCTCTTCATCAAAAACCAATTCAACAAAGTCCCTCGTGCAGGGTGGCAGATTGATCCCTTTGGACACTCTGCTGTCCAAGCTTACTTGCTGGCTGCTGAGCTTGGGCTTGACTCTGTGCACTTCGCTAGGATTGATTATCAGGACAGAGCTAAGCGCAGAGTTGATAAAACTCTTGAAGCTGTGTGGCGAGGTTCCAAGACATTTGGCTCTTCAGCACAGATATTTGCCAATAGTTTTCCTGTTCATTATAGTCCACCAAGTGGTTTTCATTTTGAAGTCAATGATGACTTTGTTCCTGTACAGGATGATCCCCTTCTATTTGATTACAATGTTGAACAGCGAGTCAACGACTTCATTTCTGCTGCTATTACACAAGCAAGTGTGACTAGGGCGAACCATATCATGTGGACAATGGGTGATGATTTCCAGTACCAATATGCCGAGTCTTGGTTCAGGCAAATGGATAAACTAATTCACTATGTTAATAAGGATGGCAGAGTCAATGCTTTATATTCTACTCCATCTATTTACACTGATGCAAAAAATGCCGCAAATCAAGCATGGCCCCTGAAAACTGATGATTACTTCCCGTATGCAGATGGACCAAATGCTTATTGGACAGGCTATTTCACTAGTCGCCCAGCCTTTAAGCGTTATGTTAGGATACTAAGTGGATATTATTTGGCAGCACGTCAACTTGAATTTTTTGTGGGAAGGAAATCCAGTGTAGACCACACTTCAGACCTTGGAGATGCTCTTGGAATTGCACAACACCATGATGCTGTCTCTGGCACTGCTACGCAACACACAACTAATGACTATGCAAAACGACTAGCTATTGGAGCCTCAAGGGCTGAAGCTGTTGTTAGTTCTTCTCTGTATTGTCTTGCTAGCAAGAGATCAGGGGTTCAATGCTCAGCACCTACATCCGCATTTTCCCAGTGTCAATTACTCAATATCAGTTATTGCCCACCAACCGAAGACATTATACCACAAGCCAAGAGTTTGGTATTAGTGGTGTATAACACACTTGGATGGAATCGCACTGACATTGTGAGAATACCAGTCAATGACGCCAATCTTATCGTCAAAGATTCATTGGGCAATAACGTTCAAACACAATATGTCGAAGTGGATAGTGTTACAGCAAATTTAAGAGAAATGTACGTCAAAGCTTATGTTGGGTTGACACCAAAACAAGCCCCAAAATACTCGCTTCTGTTTCAGGTTTCGGTACCTCCACTTGGATGGAGTACCTATTTCATTTCTAAACCAGCAATAAAAGGCAAAAGAAAGAATGGATTTCTCTCACGCCTCAGCAGTCAGACAAATAATATAATTGAAATTGGACCTGGAAATTTAAAGTTGTCCTTTTCTTCAGACTCTGGACAACTCATACGGATGCATAATTCCAGAACTGGAGTTGATGTACCAGTTCAGCAAAGCTATCTCTGGTATGGTTCTAGTTTGGACGATCAGGCTTCTGGTGCATATATATTTCGGCCTAATTCCCCTCCAAATATTGTTTCAAGATCAGTAAATTCATTTTGGTTTATAATGCATATAAAACAGGTGCCCTTAAAGATAATCCGCGGACCATTAGTTGATGAGGTTCATCAGAATTTCAGTTCTTGGATTTACCAGGTTACTAGGGTTTACAAAGACAAAGAGCATGCCGAGATTGAATACACTATTGGTCCAATTCCTACGTTGGATGGAGTTGGGAAAGAGGTGATCACGCAAATGACTGCAAATATGGTTACAAACAAGGAGTTCTATACTGATTCTAATGGAAGAGATTTTATGAAACGGGTTCGAGATCACAGAGAAGATTGGTCCCTTCAAGTTAATCAACCTGTAGCAGGAAACTATTACCCACTCAATCTTGGAATTTATATCAAGGATAAGAAATCTGAATTATCAGTCTTAGTTGATCGGGCAACTGGAGGGGCCAGTATCAGAGATGGTCAGGTGGAACTTATGCTTCATAGGCGCATAGTCTTTGATGATGGCAGAGGAGTAGACGAAGCACTTGATGAACAAGTTTGCCTAAAGGATACATGTGAAGGACTAACAGTGAGAGGAAATTATTATGTGGGGATCCACAGCCTGGGAGCTGGTTCACGATGGCGCCGGACAACTGGTCAGGAAATTTATTCGCCATTATTGTTGGGTTTTACACATGAGAACATGGGAAACTGGAAGGCCTCTCATTGGACGAAAGGAACTCTCATTGATCCTAATTACACCTTACCTCCCAACGTTGCTCTCATAACTCTTGAGGAGTTGGATAATGGAAGCGTGCTTCTCCGTTTGGCACATCTTTATGAGGCCGGTGAAGATGCTCAGTATTCAACTTTGACCAAAGTTGAATTGAAGAAAATGTTTGGCTCAAAAACGATAAAGGAGCTGATTGAGGTTAGTTTATCAGCTAACCAAGAGAAGTCTAAAATGAAGAAGAAAGCATGGAAGGTTGAAGGGGACAAGGAGCAAGAATCTCAAGCAGTTAGGGGTGGCCCTGTCAGCAATATCAATCTTGTAATTGAGCTTGGTCCCATGGAAATACGTACTTTCCTGTTGAAATTCTAA 2757 0.4189 MAFFHRWWVEQSPETQEQVRKLVDAGQLEFVNGGWCMHDEATTHYIDMIDQTTLGHLFIKNQFNKVPRAGWQIDPFGHSAVQAYLLAAELGLDSVHFARIDYQDRAKRRVDKTLEAVWRGSKTFGSSAQIFANSFPVHYSPPSGFHFEVNDDFVPVQDDPLLFDYNVEQRVNDFISAAITQASVTRANHIMWTMGDDFQYQYAESWFRQMDKLIHYVNKDGRVNALYSTPSIYTDAKNAANQAWPLKTDDYFPYADGPNAYWTGYFTSRPAFKRYVRILSGYYLAARQLEFFVGRKSSVDHTSDLGDALGIAQHHDAVSGTATQHTTNDYAKRLAIGASRAEAVVSSSLYCLASKRSGVQCSAPTSAFSQCQLLNISYCPPTEDIIPQAKSLVLVVYNTLGWNRTDIVRIPVNDANLIVKDSLGNNVQTQYVEVDSVTANLREMYVKAYVGLTPKQAPKYSLLFQVSVPPLGWSTYFISKPAIKGKRKNGFLSRLSSQTNNIIEIGPGNLKLSFSSDSGQLIRMHNSRTGVDVPVQQSYLWYGSSLDDQASGAYIFRPNSPPNIVSRSVNSFWFIMHIKQVPLKIIRGPLVDEVHQNFSSWIYQVTRVYKDKEHAEIEYTIGPIPTLDGVGKEVITQMTANMVTNKEFYTDSNGRDFMKRVRDHREDWSLQVNQPVAGNYYPLNLGIYIKDKKSELSVLVDRATGGASIRDGQVELMLHRRIVFDDGRGVDEALDEQVCLKDTCEGLTVRGNYYVGIHSLGAGSRWRRTTGQEIYSPLLLGFTHENMGNWKASHWTKGTLIDPNYTLPPNVALITLEELDNGSVLLRLAHLYEAGEDAQYSTLTKVELKKMFGSKTIKELIEVSLSANQEKSKMKKKAWKVEGDKEQESQAVRGGPVSNINLVIELGPMEIRTFLLKF* 919
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g1112 918 Gene3D Glycoside hydrolase family 38, central domain 224 302 IPR037094 GO:0004559|GO:0006013
Apr7g1112 918 Gene3D - 801 918 - -
Apr7g1112 918 SUPERFAMILY Galactose mutarotase-like 366 918 IPR011013 GO:0003824|GO:0005975|GO:0030246
Apr7g1112 918 SMART Alpha_mann_mid_2 260 334 IPR015341 GO:0004559|GO:0006013
Apr7g1112 918 SUPERFAMILY Families 57/38 glycoside transferase middle domain 260 359 IPR028995 -
Apr7g1112 918 Gene3D Glycoside hydrolase family 38, central domain 303 358 IPR037094 GO:0004559|GO:0006013
Apr7g1112 918 Gene3D - 370 481 IPR013780 -
Apr7g1112 918 Pfam Glycosyl hydrolases family 38 N-terminal domain 1 255 IPR000602 GO:0004559|GO:0006013
Apr7g1112 918 SUPERFAMILY Glycoside hydrolase/deacetylase 1 258 IPR011330 GO:0005975
Apr7g1112 918 Gene3D - 503 776 - -
Apr7g1112 918 Pfam Glycosyl hydrolases family 38 C-terminal domain 506 728 IPR011682 GO:0004559|GO:0006013
Apr7g1112 918 PANTHER ALPHA-MANNOSIDASE 1 918 - -
Apr7g1112 918 Gene3D Glycoside hydrolase 38, N terminal domain 1 223 IPR027291 -
Apr7g1112 918 Pfam Alpha mannosidase middle domain 260 351 IPR015341 GO:0004559|GO:0006013
Apr7g1112 918 PANTHER ALPHA-MANNOSIDASE 1 918 - -
Apr7g1112 918 Pfam Glycosyl hydrolases family 38 C-terminal beta sandwich domain 810 915 IPR041147 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g1112 Apr-Chr7 18092452 18100362 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr7g1112 1 873 Glycoside Hydrolase AT3G26720 59.615 0.0 1090
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g1112 K01191 - gmx:100806041 1617.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr7g1112 7 18092452 18100362 Apr7g1112 7 18092452 18100362 ECH
Apr7g1112 7 18092452 18100362 Apr3g0363 3 7231585 7241635 PCT