Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g1105 ATGGCTGCTGCTATAACTGCTGCAGTCTCCTTTCCATCCTCCAATTCCACCCCTCTTCCAAGCAAGATCTCTATCACCACCCCTCATAGAATTGTCTTCAAGAGGGTACATGTATTGAAATTGAATGGAAAAGGAGTTTGGATCAGAGCCCAAGTGACAACAGAGGCACCTACTAAGGTTGAAAAGGAATCGAAGAAACAAGAGGAAGGTGTGATCGTGAACAAGTTCAAACCCAAGAACCCATACATTGGTAGATGTCTTCTAAACACTAAGATCACTGGGGATGATGCACCTGGAGAAACTTGGCACATGGTCTTCAGCACTGAGGGAGAGCTTCCTTACAAAGAAGGGCAATCAATTGGGGTGATTCCAGATGGGGTGGACAAGAATGGCAAGCCTCACAAGCTAAGATTGTATTCAATTGCTAGCAGTGCCGTTGGTGATTTTGGAGACTCCAAAACAGTTTCTCTATGCGTGAAACGTCTTGTGTACACAAATGAAAACGGAGAACTTGTCAAGGGAGTCTGCTCAAATTTCTTGTGCGACTTGAAGCCAGGATCGGAAGTAAAGATTACTGGACCTGTTGGTAAAGAAATGCTTATGCCAAAAGATCCTAATGCCACCGTCATCATGTTGGCAACTGGTACTGGAATTGCCCCATTTCGCTCCTTTTTATGGAAAATGTTTTTCGAGAAGCACGATGATTACAAGTTCAATGGTTTGGCATGGCTCTTCTTGGGTGTCCCAACAAGCAGCTCATTACTTTATAAAGAGGAATTTGAAAAGATGAAGGAGAAAGCACCTAACAACTTCAGGCTTGACTTTGCTGTGAGTAGAGAGCAAACAAACGAAAAAGGAGAGAAAATGTACATCCAAACCCGAATGGCTCAATATGCAGAAGAGCTATGGGAATTGCTAAAGAAAGATAATACTTATGTTTATATGTGTGGACTGAAAGGGATGGAAAAGGGTATCGATGACATAATGGTGTCGTTGGCTGCAAAAGACGGTATTGATTGGGGTGAGTACAAGAGACAATTGAAGAAAGCAGAACAATGGAATGTCGAAGTCTACTAA 1077 0.4271 MAAAITAAVSFPSSNSTPLPSKISITTPHRIVFKRVHVLKLNGKGVWIRAQVTTEAPTKVEKESKKQEEGVIVNKFKPKNPYIGRCLLNTKITGDDAPGETWHMVFSTEGELPYKEGQSIGVIPDGVDKNGKPHKLRLYSIASSAVGDFGDSKTVSLCVKRLVYTNENGELVKGVCSNFLCDLKPGSEVKITGPVGKEMLMPKDPNATVIMLATGTGIAPFRSFLWKMFFEKHDDYKFNGLAWLFLGVPTSSSLLYKEEFEKMKEKAPNNFRLDFAVSREQTNEKGEKMYIQTRMAQYAEELWELLKKDNTYVYMCGLKGMEKGIDDIMVSLAAKDGIDWGEYKRQLKKAEQWNVEVY* 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g1105 358 PIRSF Frd-NADP+_RD 1 358 IPR015701 GO:0016491
Apr7g1105 358 SUPERFAMILY Riboflavin synthase domain-like 59 202 IPR017938 -
Apr7g1105 358 CDD CYPOR_like_FNR 74 358 - -
Apr7g1105 358 PIRSF FNR-PetH 7 358 IPR035442 GO:0016491
Apr7g1105 358 Gene3D - 196 358 IPR039261 -
Apr7g1105 358 Gene3D Translation factors 49 195 - -
Apr7g1105 358 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 79 201 IPR017927 GO:0016491
Apr7g1105 358 Pfam Oxidoreductase NAD-binding domain 211 325 IPR001433 GO:0016491
Apr7g1105 358 PANTHER FERREDOXIN--NADP REDUCTASE, LEAF ISOZYME 1, CHLOROPLASTIC 1 358 - -
Apr7g1105 358 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 114 124 IPR001709 GO:0016491
Apr7g1105 358 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 137 144 IPR001709 GO:0016491
Apr7g1105 358 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 174 183 IPR001709 GO:0016491
Apr7g1105 358 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 210 229 IPR001709 GO:0016491
Apr7g1105 358 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 240 249 IPR001709 GO:0016491
Apr7g1105 358 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 252 263 IPR001709 GO:0016491
Apr7g1105 358 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 288 304 IPR001709 GO:0016491
Apr7g1105 358 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 312 320 IPR001709 GO:0016491
Apr7g1105 358 PANTHER - 1 358 IPR015701 GO:0016491
Apr7g1105 358 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 199 358 IPR039261 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g1105 Apr-Chr7 18039255 18042281 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g1105 K02641 - gmx:100802032 667.537
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr7g1105 7 18039255 18042281 Apr7g1105 7 18039255 18042281 ECH
Apr3g0353 3 6983546 6986828 Apr7g1105 7 18039255 18042281 ECH
Apr7g1105 7 18039255 18042281 Apr3g0353 3 6983546 6986828 PCT