Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g0353 ATGGCTGCTGCGGTAAGTGCTGCAGTCTCCTTTCCATCTACCAAGTCTACCTCTTTATCAAGCAGGACCTCTATCATTGCCCCAGACAGAGTTTTCTTAAAGAAGGTACGTTTGATGTTTCACAGACATGTTGGAAGGGTAGTCTCCATCAGGGCTCAAGTCACCACTGAGGCACCAGCTAAGGTTGAAAAGGAGTCAAAGAAACAGGAAGAGGGTGTGGTTGTGAACAAGTTCAAACCCAAGAACCCATACATTGGTAGATGCCTTCTCAACACAAAGATCACTGGGGATGATGCTCCCGGAGAAACTTGGCACATGGTCTTCAGCACTGAGGGAGAGGTTCCTTACAGAGAGGGACAATCAATTGGGGTAATTCCAGAAGGTATTGACAAGAATGGTAAACCTCATAAACTAAGATTGTATTCCATTGCCAGTAGTGCCATTGGTGACTTTGGAGACTCCAAGACTGTTTCTCTATGCGTGAAACGATTAGTGTACACAAATGAAAACGGAGAACTTGTCAAGGGAGTCTGCTCAAATTTCTTATGTGACTTGAAGCCAGGATCTGAAGTAACAATAACTGGACCTGTTGGAAAAGAAATGCTTATGCCGAAAGATCCTAATGCCACCGTCATCATGTTGGCAACTGGAACTGGAATTGCCCCATTTCGCTCATTTTTATGGAAAATGTTCTTTGAGAAGCACGATGATTACAAGTTCAATGGTTTGGCATGGCTCTTCTTGGGTGTCCCTACTAGCAGCTCACTGCTCTATAAGGAGGAATTTGAAAAGATGAAGGAGAAATATCCTGACAACTTCAGGCTTGACTTTGCTGTGAGCAGAGAGCAAACCAATGAGAAAGGAGAAAAGATGTACATCCAAACCCGAATGGCTCAATATGCAGAAGAGCTGTGGGAATTACTGAAGAAGGATAATACTTTTGTGTATATGTGTGGACTCAAAGGAATGGAGAAGGGAATTGATGACATAATGGTGTCATTGGCTGCCAAAGATGGCATTGATTGGGCTGATTACAAGAAGCAATTGAAGAAATCAGAGCAGTGGAATGTTGAAGTCTATTAA 1083 0.4312 MAAAVSAAVSFPSTKSTSLSSRTSIIAPDRVFLKKVRLMFHRHVGRVVSIRAQVTTEAPAKVEKESKKQEEGVVVNKFKPKNPYIGRCLLNTKITGDDAPGETWHMVFSTEGEVPYREGQSIGVIPEGIDKNGKPHKLRLYSIASSAIGDFGDSKTVSLCVKRLVYTNENGELVKGVCSNFLCDLKPGSEVTITGPVGKEMLMPKDPNATVIMLATGTGIAPFRSFLWKMFFEKHDDYKFNGLAWLFLGVPTSSSLLYKEEFEKMKEKYPDNFRLDFAVSREQTNEKGEKMYIQTRMAQYAEELWELLKKDNTFVYMCGLKGMEKGIDDIMVSLAAKDGIDWADYKKQLKKSEQWNVEVY* 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g0353 360 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 116 126 IPR001709 GO:0016491
Apr3g0353 360 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 139 146 IPR001709 GO:0016491
Apr3g0353 360 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 176 185 IPR001709 GO:0016491
Apr3g0353 360 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 212 231 IPR001709 GO:0016491
Apr3g0353 360 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 242 251 IPR001709 GO:0016491
Apr3g0353 360 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 254 265 IPR001709 GO:0016491
Apr3g0353 360 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 290 306 IPR001709 GO:0016491
Apr3g0353 360 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 314 322 IPR001709 GO:0016491
Apr3g0353 360 PIRSF FNR-PetH 3 360 IPR035442 GO:0016491
Apr3g0353 360 Gene3D Translation factors 51 197 - -
Apr3g0353 360 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 201 360 IPR039261 -
Apr3g0353 360 Pfam Oxidoreductase NAD-binding domain 213 327 IPR001433 GO:0016491
Apr3g0353 360 PIRSF Frd-NADP+_RD 1 360 IPR015701 GO:0016491
Apr3g0353 360 PANTHER FERREDOXIN--NADP REDUCTASE, LEAF ISOZYME 1, CHLOROPLASTIC 1 360 - -
Apr3g0353 360 PANTHER - 1 360 IPR015701 GO:0016491
Apr3g0353 360 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 81 203 IPR017927 GO:0016491
Apr3g0353 360 SUPERFAMILY Riboflavin synthase domain-like 60 204 IPR017938 -
Apr3g0353 360 CDD CYPOR_like_FNR 76 360 - -
Apr3g0353 360 Gene3D - 198 360 IPR039261 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g0353 Apr-Chr3 6983546 6986828 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g0353 K02641 - gmx:100802032 656.366
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g0353 3 6983546 6986828 Apr3g0353 3 6983546 6986828 ECH
Apr3g0353 3 6983546 6986828 Apr7g1105 7 18039255 18042281 ECH
Apr7g1105 7 18039255 18042281 Apr3g0353 3 6983546 6986828 PCT