Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g1100 ATGGGAGACATAGTCAAGCACATACTCGCTAAGCCAATCCAGCTCGCAGACCAAATAACGCAAGCCGCCGACGAAGCAAGCTCCTTCAAGCAGGAATGCGCCGAGCTCAAGTCAAAGACCGAGAAGCTAGCCGCGCTGCTCCGCCAAGCCGCCAGAGCCAGTTCCGATCTCTACGAGCGTCCCACGCGCCGGATCGTCGAGGAAACCGAACAGGTCCTCGACAAGGCGCTTTCGCTCGTCATTAAATGCCGCGCCAACGGCCTCGTCAAGCGCGTGTTCACACTCATCCCCGCCGCTGCGTTCCGCAAGGTCTCCTCCCATCTTGAAAACTCCATCGGCGACGTCTCCTGGCTCCTCCGCGTCTCCGCCCCCGCCGACGACCGCGGCGGCGAGTACCTCGGCCTCCCTCCCATCGCCGCCAACGAGCCCATCCTCTGCCTCATCTGGGAACAGATCGCGATCCTCTACACCGGCTCGCCGGAGGACCGCTCCGACGCCGCGGCCTCCCTGGTATCCCTCGCCAGCAGCAGCGACCGTTACGGGAAGTTGATAATCGAGGAAGGTGGGGTTGGCCCCTTGTTGAAGCTCTTGAAGGAGGGGAAAACAGAGGGGCAAGAGAATGCTGCACGCGCCATTGGCCTCCTCGGGCGCGACGCGGAGAGCGTGGAGCACATGATCCACGTGGGTGTTTGCTCTGTGTTCGCGAAAATCCTTAAAGAAGGCCCTATGAAAGTGCAAAGTGTTGTGGGGTGGGCCGTGTCTGAACTCGCTTCTCATTACCCCAAGTGTCAGGATCTTTTCGCTCAGCACAATATTATAAGGTTACTGGTTGGTCACCTTGCGTTTGAAACTGTTGAAGAGCATAGTAAGTATGCGATTGTTAGCATGAAACCCACTTCTATCCACGCTGTTGTGATGGCTAGTAGTAATTCTAATAACGTTAAGAAGGAAAAAGAAGATTGGGAGAACAATGAGAAACAAGCGCAGAATTTGAGTCGGATACCACATCCCTTGGGTGAAAGATCAAGGAATTTGCATAGAGTGATTACTAGTACCATTGCAATGCATGCTGCCACCAAACAGGGTAATCAGGGAAATGAAGCAAATGAGAATCACAAGTCTTCTCTGCCCAAAAGCAATGGACTTGGTAATGATGGTAAACAAGGAAATCATCATCATCATCATCAGCGTAATTATTCACATTCGGGGATTAACATGAAGGGAAGGGATCTTGAAGAGCCTGAGACCAAGGCCAAGATGAAGGAAATGGCAGCAAGGGCACTCTGGCAGTTAGCTAAGGGTAACTCCCCAATTTGTCGTAGCATCACAGAGTCAAGGGCTCTTCTGTGTTTTGCTGTTCTCCTTGAGAAAGGGCCAGAAGCTGTGCAGTATAATTCTGCTATGGCAGTGATGGAGATAACAGCAGTGGCTGAGAAAGATGCTGATTTGAGGAAATCTGCATTCAAGCCTAACTCTCCTGCTTGCAAAGCAGTTGTTGATCAAGTGCTGAAGATAATAGAAAAAGCAGATTCAAATCTTTTAATTCCTTGCATCAAGACAATTGGGAATTTGGCAAGGACATTTAAGGCTACAGAGACAAGGATGATTGGTCCCTTGGTGAGACTTCTTGATGAAAGAGAGGCAGAGGTGTCAAGGGAAGCATCAATTGCTCTCACCAAATTTGCTGGCACAGAGAACTACCTTCACGTTGATCACTCCAAGGCAATTATAAGCGCAGGTGGGGCAAAACACTTGATTCAGCTTGTGTATTTTGGAGAACCAATGGTTCAGATTCCAGCATTGTTTTTGCTTTCCTACATTGCATTGCATGTGCCAGACAGTGAAGAACTTGCTCAGGCTGAGGTGCTTGGAGTGCTTGAATGGGCCTCCAAGCAATCCTCCATGACACATGATGAAACCCTTGAGTCATTGTTGCTAGAGTCCAGGAGTAGGTTGGAGCTTTACCAGTCTAGAGGTCCAAGAGGATTCCATAAATTGCATCAATAG 2007 0.5032 MGDIVKHILAKPIQLADQITQAADEASSFKQECAELKSKTEKLAALLRQAARASSDLYERPTRRIVEETEQVLDKALSLVIKCRANGLVKRVFTLIPAAAFRKVSSHLENSIGDVSWLLRVSAPADDRGGEYLGLPPIAANEPILCLIWEQIAILYTGSPEDRSDAAASLVSLASSSDRYGKLIIEEGGVGPLLKLLKEGKTEGQENAARAIGLLGRDAESVEHMIHVGVCSVFAKILKEGPMKVQSVVGWAVSELASHYPKCQDLFAQHNIIRLLVGHLAFETVEEHSKYAIVSMKPTSIHAVVMASSNSNNVKKEKEDWENNEKQAQNLSRIPHPLGERSRNLHRVITSTIAMHAATKQGNQGNEANENHKSSLPKSNGLGNDGKQGNHHHHHQRNYSHSGINMKGRDLEEPETKAKMKEMAARALWQLAKGNSPICRSITESRALLCFAVLLEKGPEAVQYNSAMAVMEITAVAEKDADLRKSAFKPNSPACKAVVDQVLKIIEKADSNLLIPCIKTIGNLARTFKATETRMIGPLVRLLDEREAEVSREASIALTKFAGTENYLHVDHSKAIISAGGAKHLIQLVYFGEPMVQIPALFLLSYIALHVPDSEELAQAEVLGVLEWASKQSSMTHDETLESLLLESRSRLELYQSRGPRGFHKLHQ* 669
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g1100 668 Gene3D - 407 646 IPR011989 -
Apr7g1100 668 PANTHER ARMADILLO REPEAT ONLY 4 1 664 - -
Apr7g1100 668 SUPERFAMILY ARM repeat 153 631 IPR016024 -
Apr7g1100 668 SMART arm_5 435 475 IPR000225 GO:0005515
Apr7g1100 668 SMART arm_5 176 217 IPR000225 GO:0005515
Apr7g1100 668 SMART arm_5 569 609 IPR000225 GO:0005515
Apr7g1100 668 SMART arm_5 491 526 IPR000225 GO:0005515
Apr7g1100 668 SMART arm_5 218 258 IPR000225 GO:0005515
Apr7g1100 668 Gene3D - 3 121 IPR036537 GO:0007166
Apr7g1100 668 Coils Coil 311 331 - -
Apr7g1100 668 Gene3D - 149 334 IPR011989 -
Apr7g1100 668 MobiDBLite consensus disorder prediction 361 386 - -
Apr7g1100 668 MobiDBLite consensus disorder prediction 361 407 - -
Apr7g1100 668 Pfam Armadillo/beta-catenin-like repeat 183 214 IPR000225 GO:0005515
Apr7g1100 668 PANTHER - 1 664 - -
Apr7g1100 668 Coils Coil 19 56 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g1100 Apr-Chr7 17997706 18000865 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g1100 - - mtr:MTR_5g022240 1025
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr7g1100 7 17997706 18000865 Apr7g1100 7 17997706 18000865 ECH
Apr7g1100 7 17997706 18000865 Apr3g0352 3 6975445 6978058 PCT