Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g0352 ATGGCAGACATAGTGAAGCAACTATTGGCAAGGCCGATCCAGTTAGCAGACCAAGTAACCAAAGCAGCTGAAGAGGCTAGTTCCTCGTTCAAGCAAGAATGTTTGGAGCTCAAATCAAAGACCGATAAGCTCGCGGGGCTTCTCCGACAAGCCGCAAGAGCGAGCTCTGACCTCTACGAGCGCCCAACACGACGCATCATCGCTGACACCGAACAGGTCCTCGACAAGGCCCTGTCGTTGGTCCTTAAATGCCGCGCCAACGGCCTCATGAAGCGCGTGTTCAGCATCATCCCAACGGCGGCGTTTCGCAAGATGTCCTCGCAGCTCGAGAATTCCATCGGTGACGTGTCGTGGCTCCTCCGGGTCTCGGCTCCGGCGGAGGATCGCGGCGACGAGTATTTGGGCCTTCCCCCTATTGCCGCAAATGAGCCCATTTTGGGCCTCATTTGGGAGCAGATTGCCACCCTCCACACTGGCTCTCTGGATGACCGATCTGACGCCGCCGCTTCGCTCGTGTCGCTCGCACGTGACAACGATCGTTACGGGAATTTGATCATTGAGGAAGGTGGGGTTGGACCCTTGTTGAAGTTGATCAAGGAGGGGAAGAAGGAGGGTCAAGAGAACGCTGCCAGGGCTATTGGGCTTCTGGGCCGTGACCCTGAGAGCGTGGAGCTCATGATTCATGCTGGTGTGTGCTCTGTGTTCGCCAAAGTCCTCAAAGAAGGTCCCATGAAAGTCCAAGCTGTGGTTGCCTGGGCTGTGTCCGAGTTGGCCGCAAAGTACCCCAAATGCCAAGACCTTTTTGCTCAGCATAACATCGTTCGCTTGCTTGTAAGTCATCTAGCGTTTGAAACCGTTCAAGAGCACAGTAAATATGCCATTGTTAGCAACAAACCCACTTCAATCCACGCGGTTGTGATGGCTAGTAATAATTCTAATGCTAATAATATGAAGAAGGAGAATGAAGACGAGGATAGGCATATGCAAAGTCGGATACAGCATCCGTTGGGTGATAGGTCCCCAAATCAGATGCATAAAGTGGTCACAAGTACCATGGCAATGCATGCTGCTGCCAAGCAACAGACCAATCAAGGAAACGAAGCATGTCAGAACTCCCAGGGTACTCAGTCCAAAGCCAATGGGCTTAGTAATGGTAAGCAAAGTCATCAATCACACCAGCAAAGCTATTCCTATTCTGGAATTAACATGAAGGGAAGGGAACTTGAAGACCCCGAGAATAAGGCTTACATGAAAGCAATGGCAGCAAGAGCCCTCCGGCAGCTAGCAAAGGGTAACTCGGCCATTTGTCGGAGCATAACAGAGTCAAGGGCTCTGCTGTGCTTTGCCATTCTCCTTGAGAAAGGGACTGAAGATGTGATGTACAACTCTGCCATGGCAGTGAAGGAGATTACAGCAGTGGCAGAAAAAGATGCAGAATTGAGAAGATCAGCATTCAAGCCCAACTCTCCTGCTTGTAAGGCAGTTGTTGATCAAGTGCTTATGATCATTGAGAAAGAAGATACAAAACTCCTAATTCCTTGCATAAAGGCTATTGGGAATTTGGCAAGGACATTCCGAGCAACAGAGACAAGGATAATTGGTCCCTTGGTCCAGCTTCTTGACGAAAGAGAGGCAGAAGTATCCAGGGAAGCGGCAATCTCTCTCACAAAATTTGCCTCCCCAGATAACTACCTTCATCTTGATCACTCCAAAGCAATTATAAGCGCAGGTGGAGCAAAACACTTGGTCCAGCTTGTATATCTTGGAGAACAGACAGTTCAGATTTCAGCTTTAGTCCTGCTCTGCTACACTGCATTGCATGTGCCAGATAGTGAAGAACTTGCTCGGACCGAGGTGCTCGGCGTGCTTGAATGGGCATCCAAGCAACCTAACATGACACAAGACGAAACCCTCGAGGCATTATTGCAAGAATCCAAGAGTAGGCTGGAGCTTTACCAGTCTAGAGGTTCAAGAGGATTCCAAAAATTACATCAATAG 1998 0.4975 MADIVKQLLARPIQLADQVTKAAEEASSSFKQECLELKSKTDKLAGLLRQAARASSDLYERPTRRIIADTEQVLDKALSLVLKCRANGLMKRVFSIIPTAAFRKMSSQLENSIGDVSWLLRVSAPAEDRGDEYLGLPPIAANEPILGLIWEQIATLHTGSLDDRSDAAASLVSLARDNDRYGNLIIEEGGVGPLLKLIKEGKKEGQENAARAIGLLGRDPESVELMIHAGVCSVFAKVLKEGPMKVQAVVAWAVSELAAKYPKCQDLFAQHNIVRLLVSHLAFETVQEHSKYAIVSNKPTSIHAVVMASNNSNANNMKKENEDEDRHMQSRIQHPLGDRSPNQMHKVVTSTMAMHAAAKQQTNQGNEACQNSQGTQSKANGLSNGKQSHQSHQQSYSYSGINMKGRELEDPENKAYMKAMAARALRQLAKGNSAICRSITESRALLCFAILLEKGTEDVMYNSAMAVKEITAVAEKDAELRRSAFKPNSPACKAVVDQVLMIIEKEDTKLLIPCIKAIGNLARTFRATETRIIGPLVQLLDEREAEVSREAAISLTKFASPDNYLHLDHSKAIISAGGAKHLVQLVYLGEQTVQISALVLLCYTALHVPDSEELARTEVLGVLEWASKQPNMTQDETLEALLQESKSRLELYQSRGSRGFQKLHQ* 666
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g0352 665 PANTHER - 1 660 - -
Apr3g0352 665 Gene3D - 3 122 IPR036537 GO:0007166
Apr3g0352 665 MobiDBLite consensus disorder prediction 359 395 - -
Apr3g0352 665 Gene3D - 150 332 IPR011989 -
Apr3g0352 665 Gene3D - 393 650 IPR011989 -
Apr3g0352 665 Pfam Armadillo/beta-catenin-like repeat 184 215 IPR000225 GO:0005515
Apr3g0352 665 SMART arm_5 488 523 IPR000225 GO:0005515
Apr3g0352 665 SMART arm_5 219 259 IPR000225 GO:0005515
Apr3g0352 665 SMART arm_5 566 606 IPR000225 GO:0005515
Apr3g0352 665 SMART arm_5 432 472 IPR000225 GO:0005515
Apr3g0352 665 SMART arm_5 177 218 IPR000225 GO:0005515
Apr3g0352 665 PANTHER ARMADILLO REPEAT ONLY 4 1 660 - -
Apr3g0352 665 SUPERFAMILY ARM repeat 154 633 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g0352 Apr-Chr3 6975445 6978058 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g0352 - - gmx:100794693 1129.39
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g0352 3 6975445 6978058 Apr3g0352 3 6975445 6978058 ECH
Apr7g1100 7 17997706 18000865 Apr3g0352 3 6975445 6978058 PCT