Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g1025 CCCTCAACACCTCCAACCATTGCCAACCCGTTAACTCTCAAAGGCGAAATCGACATAGCCCTTAATCATCTACGCAACGCAGATCCCCTTTTAGCCCCTTGCATCGATTCCTTCAACCCTCCACAGTTCTTAACCGATCGCGCACCCTTCTTCGCTCTCACCAAAAGCATAATCTCCCAACAACTTTCCAACAAAGCCGCCGATGCCATCGAAGCCCGTTTCGTCACCCTCTGCGGCGGCCGCCACTCCGTCCTCCCCGACGTCGTTTTGTCCCTCTCCCCTCAACAGCTCCGCCTCGTCGGCATTTCCGGACCCAAAGCCTCTTACCTCCACGACCTCGCTTCCAAATTCGCCGATGGGGTTCTGTCCGATTCTTCTGTGCTTGAAATGGACGATGACACGCTCCGCGACAAGCTCATTTCTGTTAAGGGGATTGGGCCTTGGTCCGTTCACATGTTCATGATCTTCACTCTTCACCGCCCCGACGTTCTCCCTGTTGGAGACCTCGTCGTTCGGAGAGGCGTGGAACGCTTGTATGGACTCAAGGCTTTGCCCACACCTTCCCAAATGGAACGCTTGTGCGAGAAATGGAAGCCTTATAGGTCGGTTGGGTCTTGGTATATGTACAAGCTTGTGGAAGCTAAAGGGGTCTTTCCCACCCCCACTCTGAATCAGCAATAG 681 0.5404 PSTPPTIANPLTLKGEIDIALNHLRNADPLLAPCIDSFNPPQFLTDRAPFFALTKSIISQQLSNKAADAIEARFVTLCGGRHSVLPDVVLSLSPQQLRLVGISGPKASYLHDLASKFADGVLSDSSVLEMDDDTLRDKLISVKGIGPWSVHMFMIFTLHRPDVLPVGDLVVRRGVERLYGLKALPTPSQMERLCEKWKPYRSVGSWYMYKLVEAKGVFPTPTLNQQ* 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g1025 226 Gene3D - 22 210 - -
Apr7g1025 226 PANTHER HHH-GPD BASE EXCISION DNA REPAIR FAMILY PROTEIN 4 218 - -
Apr7g1025 226 PANTHER DNA-3-METHYLADENINE GLYCOSYLASE 4 218 - -
Apr7g1025 226 CDD ENDO3c 52 211 IPR003265 GO:0006284
Apr7g1025 226 Pfam HhH-GPD superfamily base excision DNA repair protein 55 198 IPR003265 GO:0006284
Apr7g1025 226 Gene3D Hypothetical protein; domain 2 46 160 - -
Apr7g1025 226 SMART endo3end 58 213 IPR003265 GO:0006284
Apr7g1025 226 SUPERFAMILY DNA-glycosylase 38 209 IPR011257 GO:0003824|GO:0006281
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g1025 Apr-Chr7 17310635 17311315 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g1025 K01247 - mnt:21403226 294.278
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr5g1586 5 19641072 19645617 Apr7g1025 7 17310635 17311315 ECH
Apr7g1025 7 17310635 17311315 Apr7g1025 7 17310635 17311315 ECH