Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g1586 ATGGGCGAACACACGCGAGGTCAAGCACAATCCCTAATTGAACCGCAACCCAACCCTCACCCTCAACCGCCTTCCTCCGCCGCCGCCACCACCGTTCTTGACTCCTTGCCGGCGGACCCCGAACTCAGCAATGCTCCTCCTCCAACAAACTCCCCCGCCTCCAAAATCCCCCTCCGTCCCCGTAAGATCCGTAAGGTCTCGCCGGACCCGTCCACCTCCGAATCTCAAACCGAAACGCCGAAAGGCTTGTCCACCGGTGGGAAGAGTAATGCCCGCAACAACAAAATTGTTCAGCCACAACGAGCCTTGGTGGTTCCGAGAATGGTTGCTAGGTCACTGTCGTGTGAAGGCGAGGTGGAGATCGCACTGCGATACCTTCGCAACGCTGACCCACTCCTCTGCTCTCTAATCGGCATTCACCAACCTCCTACCTTCGACAATTTCCACACTCCATTCCTTGCCCTAACTCGTAGCATCTTGTACCAGCAACTGGCTTATAAAGCGGGTACCTCAATCTATACTCGCTTCATCTCTCTCTGCGGTGGGGAACCCGGTGTGGTTCCCGAAACCGTTCTTGCCCTAACTCCCCAACAGCTTCGCCAAATTGGGGTTTCGGGGAGAAAGGCGAGTTATCTTCACGATTTGGCGAGGAAGTACCAGAATGGAATACTATCTGATTCGGCCATTGTGAATATGGATGATAAATCGCTCTTCACTATGCTCACCATGGTCAATGGAATTGGTTCTTGGTCTGTTCACATGTTTATGATCTTCTCCCTCCATAGACCCGATGTTCTTCCTATTAACGATCTTGGTGTTCGCAAAGGGGTTCAGCTTCTTTACAATCTTGATGACTTGCCTCGTCCCTCTCAGATGGACCAGTTGTGTGAGAAGTGGAGGCCTTATCGCTCTGTTGCTTCTTGGTATTTGTGGAGATTTGTTGAAGCCAAGGGAACTCCTTCTAGTGCTGTGGCTGTTGCTACTGGTGCCAGCTTGCAGCAGCACCAGCAGGAGCAGCAACAGCAGCAGCAGCAGCAGCAGCACCCTCCGCAGCCACAGCTTCTGGATCCCATAAATAGCATGTTTAATCTTGGGGCCGCCTGTGCTTGGGGACAATGA 1119 0.529 MGEHTRGQAQSLIEPQPNPHPQPPSSAAATTVLDSLPADPELSNAPPPTNSPASKIPLRPRKIRKVSPDPSTSESQTETPKGLSTGGKSNARNNKIVQPQRALVVPRMVARSLSCEGEVEIALRYLRNADPLLCSLIGIHQPPTFDNFHTPFLALTRSILYQQLAYKAGTSIYTRFISLCGGEPGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYNLDDLPRPSQMDQLCEKWRPYRSVASWYLWRFVEAKGTPSSAVAVATGASLQQHQQEQQQQQQQQQHPPQPQLLDPINSMFNLGAACAWGQ* 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g1586 372 Gene3D - 125 312 - -
Apr5g1586 372 PANTHER BNAC05G15000D PROTEIN 29 366 - -
Apr5g1586 372 SUPERFAMILY DNA-glycosylase 142 313 IPR011257 GO:0003824|GO:0006281
Apr5g1586 372 CDD ENDO3c 152 313 IPR003265 GO:0006284
Apr5g1586 372 MobiDBLite consensus disorder prediction 1 95 - -
Apr5g1586 372 Pfam HhH-GPD superfamily base excision DNA repair protein 157 300 IPR003265 GO:0006284
Apr5g1586 372 MobiDBLite consensus disorder prediction 69 95 - -
Apr5g1586 372 PANTHER DNA-3-METHYLADENINE GLYCOSYLASE 29 366 - -
Apr5g1586 372 Gene3D Hypothetical protein; domain 2 149 262 - -
Apr5g1586 372 SMART endo3end 160 315 IPR003265 GO:0006284
Apr5g1586 372 MobiDBLite consensus disorder prediction 333 356 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g1586 Apr-Chr5 19641072 19645617 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g1586 K01247 - gmx:100790760 578.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr5g1586 5 19641072 19645617 Apr7g1025 7 17310635 17311315 ECH
Apr5g1586 5 19641072 19645617 Apr5g1586 5 19641072 19645617 ECH