Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g1024 ATGAGTTTGAGGGAAGAATGTGAAGATCTTAGGAAGAGCTTCCTCAACACTGGGAGCTGGTACAAAATGGGTTCGAGGCAATCAAGCATCATGGCCTCTTCTCACCATGTCATGCGTGATGCCTCTGTTTCTGTCCTCTTTTGTGTCCTCATCGTTGCATTGGGTCCTATTCAATTCGGCTTCACGTGTGGCTATTCTTCTCCGACGCAAGAGAGTATAATAAGCGATCTAAAGCTCTCACTTTCGGAGTTCTCGCTATTTGGATCTTTATCCAATGTGGGAGCCATAACCAGTGGTCAAATGGCAGAATACACCGGACGCAAAGGGGCATTGATGATTGCCGCAATCCCCAATATATTAGGATGGCTCGCCATTTCTTTTGCCGATGACTCATCGTTTTTATTTATGGGGAGGTTTTTGGAAGGCTTTGGCGTTGGGATAATCTCTTACGTGGTGCCTGTTTATATAGCTGAGATATCACCTCAAAACATGCGAGGTACCCTTGGATCGGTGAACCAGCTCTCAATCACAATTGGAATAATGCTTGCTTATCTGTTGGGCCTTTTTGTCAACTGGAGAGTACTTGCAGTTCTAGGAATTTTTCCTTGTACAATATTAATACCTGGATTATTTTTCATACCAGAATCTCCCAGGTGGTTGGCCAAGATGGGGATGACAGAAGAGTTTGAGACTTCTTTGCAAGTGTTACGAGGATTTGACACAGATATATCACTTGAAGTACATGAAATTAAGAGATCTGTGGCATCAACGGGAAAAAGTGTTACAATTCAGTTTGCAGATCTCAAGATGAAAAGATATTGGTTTCCTTTAATGGTAGGAATTGGATTGCTTGTACTTCAGCAATTGAGTGGTGCCAATGGAGTTCTGTTCTATTCAAGTACCATATTTGCAAATGCAGGAATTTCATCCAGCAATACTGCTACAGTTGGACTTGGAGCTATACAGGTCATAATGACTGGAATCACTACTTGGTTGGTGGACAAAAGTGGCCGGAGGCTGCTTCTAATAATATCCGCATCTATAATGTCAGTTAGCCTTCTCCTTGTTTCTATAGCATTCTATCTAGAGGGAGTCACATCAGAGGATTCTTGTCTATACGGCATTTTGGGAATACTTTCTGTTGCTGGGCTTGTGGCTATGGTAATTGGCTACTCTCTAGGACTTGGACCAATCCCTTGGCTTATAATGTCTGAGATACTTCCAGTGAATATAAAGGGCCTAGCTGGCAGCATAGCCACCTTGACTAATTGGATGACTTCCTGGATCATCACAATGACTGCAAACTTGCTTTTGACTTGGAGCAGTGGAGGGACATTCTTAATCTACACTGCGGTAGCTGCCTTTACTGTTGCTTTTGCGGCAATATGGGTCCCTGAGACCAAGGGAAGAACATTGGAAGAAATTCAGTTTTCCTTTAGATAG 1443 0.4297 MSLREECEDLRKSFLNTGSWYKMGSRQSSIMASSHHVMRDASVSVLFCVLIVALGPIQFGFTCGYSSPTQESIISDLKLSLSEFSLFGSLSNVGAITSGQMAEYTGRKGALMIAAIPNILGWLAISFADDSSFLFMGRFLEGFGVGIISYVVPVYIAEISPQNMRGTLGSVNQLSITIGIMLAYLLGLFVNWRVLAVLGIFPCTILIPGLFFIPESPRWLAKMGMTEEFETSLQVLRGFDTDISLEVHEIKRSVASTGKSVTIQFADLKMKRYWFPLMVGIGLLVLQQLSGANGVLFYSSTIFANAGISSSNTATVGLGAIQVIMTGITTWLVDKSGRRLLLIISASIMSVSLLLVSIAFYLEGVTSEDSCLYGILGILSVAGLVAMVIGYSLGLGPIPWLIMSEILPVNIKGLAGSIATLTNWMTSWIITMTANLLLTWSSGGTFLIYTAVAAFTVAFAAIWVPETKGRTLEEIQFSFR* 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g1024 480 PRINTS Sugar transporter signature 56 66 IPR003663 GO:0016020|GO:0022857|GO:0055085
Apr7g1024 480 PRINTS Sugar transporter signature 135 154 IPR003663 GO:0016020|GO:0022857|GO:0055085
Apr7g1024 480 PRINTS Sugar transporter signature 287 297 IPR003663 GO:0016020|GO:0022857|GO:0055085
Apr7g1024 480 PRINTS Sugar transporter signature 381 402 IPR003663 GO:0016020|GO:0022857|GO:0055085
Apr7g1024 480 PRINTS Sugar transporter signature 404 416 IPR003663 GO:0016020|GO:0022857|GO:0055085
Apr7g1024 480 SUPERFAMILY MFS general substrate transporter 46 476 IPR036259 -
Apr7g1024 480 CDD MFS_GLUT6_8_Class3_like 46 474 IPR044775 GO:0008643|GO:0051119
Apr7g1024 480 TIGRFAM SP: MFS transporter, sugar porter (SP) family 37 475 IPR003663 GO:0016020|GO:0022857|GO:0055085
Apr7g1024 480 PANTHER MAJOR FACILITATOR, SUGAR TRANSPORTER, MAJOR FACILITATOR SUPERFAMILY-RELATED 12 478 - -
Apr7g1024 480 ProSitePatterns Sugar transport proteins signature 2. 140 165 IPR005829 GO:0016021|GO:0022857|GO:0055085
Apr7g1024 480 ProSiteProfiles Major facilitator superfamily (MFS) profile. 28 468 IPR020846 GO:0022857
Apr7g1024 480 Gene3D MFS general substrate transporter like domains 38 480 IPR036259 -
Apr7g1024 480 PANTHER - 12 478 - -
Apr7g1024 480 Pfam Sugar (and other) transporter 49 476 IPR005828 GO:0016021|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g1024 Apr-Chr7 17301975 17307574 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr7g1024 1 480 Organic Solute Cotransporters AT1G75220 74.385 0.0 713
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g1024 K03444 - gmx:100813399 767.303
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr7g1024 7 17301975 17307574 Apr7g1024 7 17301975 17307574 ECH
Apr3g0285 3 5538237 5543340 Apr7g1024 7 17301975 17307574 ECH